RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 PROSER1Q86XN7 944 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 RHOT1Q8IXI2 618 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 CCDC170Q8IYT3 715 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 FSTL5Q8N475 847 aaPredicted RBP15.31■□□□□ 0.04
TRIM28-203ENST00000593582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.31■□□□□ 0.04
TRIM28-203ENST00000593582 PLA2G15Q8NCC3 412 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 TPCN2Q8NHX9 752 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 MDM1Q8TC05 714 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 GLMNQ92990 594 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 TSACCQ96A04 125 aaPredicted RBP15.31■□□□□ 0.04
TRIM28-203ENST00000593582 HDAC11Q96DB2 347 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 WDR92Q96MX6 357 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 DDX56Q9NY93 547 aaKnown RBP15.31■□□□□ 0.04
TRIM28-203ENST00000593582 DTLQ9NZJ0 730 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 KLQ9UEF7 1012 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 SALL4Q9UJQ4 1053 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 DOLKQ9UPQ8 538 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 CLCA2Q9UQC9 943 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 HEY1Q9Y5J3 304 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 CELSR3Q9NYQ7 3312 aa15.31■□□□□ 0.04
TRIM28-203ENST00000593582 LY6G6EA0A0G2JKS1 128 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 C3orf70A6NLC5 250 aaPredicted RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 APOL1O14791 398 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 HEXIM1O94992 359 aaKnown RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 RASGRP1O95267 797 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 KRT1P04264 644 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ANXA6P08133 673 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ALPIP09923 528 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 MYF5P13349 255 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 TNNT1P13805 278 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ZFXP17010 805 aaPredicted RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 CA4P22748 312 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 KELP23276 732 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 NOP2P46087 812 aaKnown RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 RPIAP49247 311 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 SRP54P61011 504 aaKnown RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 INSM1Q01101 510 aaPredicted RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 SLC10A2Q12908 348 aaPredicted RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 TARDBPQ13148 414 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 C1orf61Q13536 156 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ARHGEF7Q14155 803 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ELOCQ15369 112 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 SPA17Q15506 151 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ALG11Q2TAA5 492 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 DENND2CQ68D51 928 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ESRP1Q6NXG1 681 aaKnown RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 PNCKQ6P2M8 343 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 RD3Q7Z3Z2 195 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 CCDC13Q8IYE1 715 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 SCG3Q8WXD2 468 aaKnown RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 NUS1Q96E22 293 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 COQ10AQ96MF6 247 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 MCCC1Q96RQ3 725 aaPredicted RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 ABCG4Q9H172 646 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 WDR26Q9H7D7 661 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 LUC7LQ9NQ29 371 aaKnown RBP15.3■□□□□ 0.04
TRIM28-203ENST00000593582 U3KQA8 63 aa15.3■□□□□ 0.04
TRIM28-203ENST00000593582 PLXNB3Q9ULL4 1909 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 NPIPB15A6NHN6 443 aaPredicted RBP15.29■□□□□ 0.04
TRIM28-203ENST00000593582 PSMD11O00231 422 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 PDE2AO00408 941 aaPredicted RBP15.29■□□□□ 0.04
TRIM28-203ENST00000593582 YY2O15391 372 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 TNFP01375 233 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 HOXC4P09017 264 aaPredicted RBP15.29■□□□□ 0.04
TRIM28-203ENST00000593582 GM2AP17900 193 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 COMTP21964 271 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 CYLC1P35663 651 aaPredicted RBP15.29■□□□□ 0.04
TRIM28-203ENST00000593582 TRIM23P36406 574 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 ZNF75DP51815 510 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 EPHB1P54762 984 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 KIAA1024LP59773 190 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 DSC2Q02487 901 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 NR0B2Q15466 257 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 CDKN3Q16667 212 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 C6orf132Q5T0Z8 1188 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 SLC9A4Q6AI14 798 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 CACTIN-AS1Q8N1I8 211 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 SDR16C5Q8N3Y7 309 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 PLD5Q8N7P1 536 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 OR56A4Q8NGH8 313 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 IFI44Q8TCB0 444 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 LRRN4Q8WUT4 740 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 PIH1D2Q8WWB5 315 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 FUBP1Q96AE4 644 aaKnown RBP15.29■□□□□ 0.04
TRIM28-203ENST00000593582 NXPE2Q96DL1 559 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 MRFAP1L1Q96HT8 127 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 LGMNQ99538 433 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 BOCQ9BWV1 1114 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 CLPBQ9H078 707 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 RBSNQ9H1K0 784 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 DKK4Q9UBT3 224 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 PPIL1Q9Y3C6 166 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 HYOU1Q9Y4L1 999 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 DGKBQ9Y6T7 804 aa15.29■□□□□ 0.04
TRIM28-203ENST00000593582 TDRD6O60522 2096 aaKnown RBP15.29■□□□□ 0.04
TRIM28-203ENST00000593582 ANKRD36A6QL64 1941 aa15.28■□□□□ 0.04
TRIM28-203ENST00000593582 CPED1A4D0V7 1026 aa15.28■□□□□ 0.04
TRIM28-203ENST00000593582 KCNK1O00180 336 aa15.28■□□□□ 0.04
TRIM28-203ENST00000593582 TAF4O00268 1085 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms