RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ZNF177Q13360 481 aaPredicted RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 RCN1Q15293 331 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 TMEM199Q8N511 208 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 KDM1BQ8NB78 822 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 SGF29Q96ES7 293 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 CLPTM1LQ96KA5 538 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 WDR55Q9H6Y2 383 aaPredicted RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 MAFFQ9ULX9 164 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 ARIH1Q9Y4X5 557 aaPredicted RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 A0A088AWK7 358 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 NEMP2A6NFY4 417 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 A8MT66 165 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 INSIG1O15503 277 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 CIB2O75838 187 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 IPO13O94829 963 aaKnown RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 FDXRP22570 491 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 GCKP35557 465 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 PTDSS1P48651 473 aaKnown RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 ZNF140P52738 457 aaPredicted RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 SLC25A3Q00325 362 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 PTPRCAPQ14761 206 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 LSM12Q3MHD2 195 aaKnown RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 CXorf57Q6NSI4 855 aaKnown RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 FBXO46Q6PJ61 603 aaPredicted RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 TMEM207Q6UWW9 146 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 OR13C4Q8NGS5 318 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 KCNV2Q8TDN2 545 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 STMN2Q93045 179 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 DDX50Q9BQ39 737 aaKnown RBP19.74■□□□□ 0.75
CLIP3-206ENST00000593074 CCDC28BQ9BUN5 200 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 NUF2Q9BZD4 464 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 ZNF385DQ9H6B1 395 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 STOML2Q9UJZ1 356 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 INSL5Q9Y5Q6 135 aa19.74■□□□□ 0.75
CLIP3-206ENST00000593074 ANAPC1Q9H1A4 1944 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 LTBP2Q14767 1821 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 GOLGA8QA0A0J9YX86 632 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 GOLGA8OA6NCC3 632 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 GOLGA8NF8WBI6 632 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 KIAA0355O15063 1070 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 SLC22A2O15244 555 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 PIRTP0C851 137 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 KCNA5P22460 613 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 PPM1AP35813 382 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 SEMA3AQ14563 771 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 TYSND1Q2T9J0 566 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 ACAD11Q709F0 780 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 WBP2Q969T9 261 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 PANX3Q96QZ0 392 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.73■□□□□ 0.75
CLIP3-206ENST00000593074 STOML1Q9UBI4 398 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 CDYLQ9Y232 598 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 PLXNA4Q9HCM2 1894 aa19.73■□□□□ 0.75
CLIP3-206ENST00000593074 BUD23O43709 281 aaKnown RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 CRTAMO95727 393 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 COX4I1P13073 169 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 CES1P23141 567 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 PSMA3P25788 255 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 EPHA3P29320 983 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 SUOXP51687 545 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 STC1P52823 247 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 ACTR3P61158 418 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 BTKQ06187 659 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 CYTH1Q15438 398 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 ZNF549Q6P9A3 640 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 RIPOR1Q6ZS17 1223 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 FRMD7Q6ZUT3 714 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 PIM3Q86V86 326 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 RNF135Q8IUD6 432 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 SPNS2Q8IVW8 549 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 OR4L1Q8NH43 312 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 TDRD1Q9BXT4 1180 aaKnown RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 OSBPL1AQ9BXW6 950 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 SHCBP1LQ9BZQ2 653 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 CATSPERZQ9NTU4 200 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 NLE1Q9NVX2 485 aaPredicted RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 STX18Q9P2W9 335 aaKnown RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 CRYL1Q9Y2S2 319 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 NEMP1O14524 444 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 JUNP05412 331 aaKnown RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 MBL2P11226 248 aaPredicted RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 SCNN1BP51168 640 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 TIAL1Q01085 375 aaKnown RBP eCLIP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 C6orf163Q5TEZ5 329 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 SLC22A9Q8IVM8 553 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 HERC6Q8IVU3 1022 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 GPR65Q8IYL9 337 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 CPSF7Q8N684 471 aaKnown RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 ACTRT2Q8TDY3 377 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 ARMC5Q96C12 935 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 MAELQ96JY0 434 aaKnown RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 ZFRQ96KR1 1074 aaKnown RBP19.72■□□□□ 0.75
CLIP3-206ENST00000593074 ZNF570Q96NI8 536 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 POPDC3Q9HBV1 291 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 SPO11Q9Y5K1 396 aa19.72■□□□□ 0.75
CLIP3-206ENST00000593074 TEX28O15482 410 aa19.71■□□□□ 0.75
CLIP3-206ENST00000593074 TSPAN3O60637 253 aa19.71■□□□□ 0.75
CLIP3-206ENST00000593074 BAIAP3O94812 1187 aa19.71■□□□□ 0.75
CLIP3-206ENST00000593074 LATS1O95835 1130 aa19.71■□□□□ 0.75
CLIP3-206ENST00000593074 PRLP01236 227 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms