RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 CYP20A1Q6UW02 462 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 BBS12Q6ZW61 710 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 TPD52L3Q96J77 140 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 COQ7Q99807 217 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 OSBPL11Q9BXB4 747 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 POLMQ9NP87 494 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 URADA6NGE7 173 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 NFKB1P19838 968 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PSMB4P28070 264 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 GSTT1P30711 240 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PSME3P61289 254 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 SLC25A52Q3SY17 297 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 FGD3Q5JSP0 725 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 LCLAT1Q6UWP7 414 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 DLK2Q6UY11 383 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 MOSPD2Q8NHP6 518 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 Q96MT0 163 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 LHX5Q9H2C1 402 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PRDM12Q9H4Q4 367 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PNPLA3Q9NST1 481 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PIH1D1Q9NWS0 290 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 MBD2Q9UBB5 411 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 TGFB1I1O43294 461 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PAGE1O75459 146 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 MFN2O95140 757 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PRNPP04156 253 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 EPHX1P07099 455 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 NOS3P29474 1203 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 TCEA2Q15560 299 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 KLHL12Q53G59 568 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 MIIPQ5JXC2 388 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 IL27RAQ6UWB1 636 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 STRADAQ7RTN6 431 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 CACTIN-AS1Q8N1I8 211 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 OR7A2PQ8NGA2 310 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 TIFAQ96CG3 184 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 ASB3Q9Y575 518 aa13.36□□□□□ -0.27
SMARCA4-216ENST00000591545 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ANPEPP15144 967 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 LPOP22079 712 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 SLC5A3P53794 718 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 GAD2Q05329 585 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 MACC1Q6ZN28 852 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 CHST9Q7L1S5 443 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 RNF148Q8N7C7 305 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ZSCAN18Q8TBC5 510 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 MYDGFQ969H8 173 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 MBOAT7Q96N66 472 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ERVW-1Q9UQF0 538 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 LRRC72A6NJI9 287 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 PTGES3LE9PB15 166 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 FSCN2O14926 492 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 HDAC3O15379 428 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 PKNOX1P55347 436 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 IRF8Q02556 426 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 CDK18Q07002 472 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 MAPK11Q15759 364 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 KLHL17Q6TDP4 642 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 KIAA0408Q6ZU52 694 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 FEM1CQ96JP0 617 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 SNX27Q96L92 541 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 SLC39A8Q9C0K1 460 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 CORO1CQ9ULV4 474 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 SNX6Q9UNH7 406 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 PTPRJQ12913 1337 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 VAV1P15498 845 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 SMIM11AP58511 58 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 TEAD4Q15561 434 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ING5Q8WYH8 240 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 DNAJC1Q96KC8 554 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ST6GALNAC4Q9H4F1 302 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 CCNB1IP1Q9NPC3 277 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ZDHHC4Q9NPG8 344 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 SAE1Q9UBE0 346 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 FGF1P05230 155 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 ITGA2P17301 1181 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 GABRB2P47870 512 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 SLC9A5Q14940 896 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 TPGS2Q68CL5 300 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 PRELID2Q8N945 189 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 LEMD2Q8NC56 503 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 FLCNQ8NFG4 579 aa13.35□□□□□ -0.27
SMARCA4-216ENST00000591545 RPL22P35268 128 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 IL17AQ16552 155 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 ZDHHC20Q5W0Z9 365 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 CLYBLQ8N0X4 340 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms