RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 OGFOD3Q6PK18 319 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 CLEC14AQ86T13 490 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 SRLQ86TD4 932 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ZSWIM9Q86XI8 627 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 CAMK1DQ8IU85 385 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ARL10Q8N8L6 244 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ATL2Q8NHH9 583 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 WDR36Q8NI36 951 aaKnown RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 PRR7Q8TB68 274 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 FNIP1Q8TF40 1166 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 CCDC97Q96F63 343 aaPredicted RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ATXN7L3BQ96GX2 97 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 EXOC2Q96KP1 924 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 TAS2R14Q9NYV8 317 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 SATB2Q9UPW6 733 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ATP8A1Q9Y2Q0 1164 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 DGKBQ9Y6T7 804 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 MGAQ8IWI9 3026 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 CAPN8A6NHC0 703 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 TMX2-CTNND1H3BSU7 103 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 EEF2KO00418 725 aaKnown RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 TNFRSF10CO14798 259 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 KLK10O43240 276 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 PALMO75781 387 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 RNF8O76064 485 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 PRB1P04280 392 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 CELA2BP08218 269 aaPredicted RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 CTSEP14091 401 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 ERCC2P18074 760 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 RGRP47804 291 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 PDX1P52945 283 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 SRP54P61011 504 aaKnown RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 POLR2LP62875 67 aaKnown RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 MTM1Q13496 603 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 CA9Q16790 459 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 C3orf38Q5JPI3 329 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 E4F1Q66K89 784 aaPredicted RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 ENPP7Q6UWV6 458 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 CYP4V2Q6ZWL3 525 aaPredicted RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 GKN2Q86XP6 184 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 HID1Q8IV36 788 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 ARHGAP12Q8IWW6 846 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 TSEN2Q8NCE0 465 aaKnown RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 GPR156Q8NFN8 814 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 OR6C4Q8NGE1 309 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 KCNE4Q8WWG9 221 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 TSACCQ96A04 125 aaPredicted RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 LIN37Q96GY3 246 aaPredicted RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 CELF6Q96J87 481 aaKnown RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 RBM15Q96T37 977 aaKnown RBP eCLIP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 NCAPGQ9BPX3 1015 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 CCDC3Q9BQI4 270 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 DHX35Q9H5Z1 703 aaKnown RBP10.46□□□□□ -0.73
VPS4B-207ENST00000591519 ATP13A3Q9H7F0 1226 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 AIPL1Q9NZN9 384 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 AP4E1Q9UPM8 1137 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 COQ6Q9Y2Z9 468 aa10.46□□□□□ -0.73
VPS4B-207ENST00000591519 KIF26BQ2KJY2 2108 aa10.46□□□□□ -0.74
VPS4B-207ENST00000591519 HELZ2Q9BYK8 2649 aaKnown RBP10.46□□□□□ -0.74
VPS4B-207ENST00000591519 GCN1Q92616 2671 aaKnown RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 CCDC187A0A096LP49 1063 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 TRAFD1O14545 582 aaPredicted RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 CASC3O15234 703 aaKnown RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 CBFA2T2O43439 604 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 TNFP01375 233 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 FTLP02792 175 aaPredicted RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 TPM3P06753 285 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 PSMA2P25787 234 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 SERPINA4P29622 427 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 MIPP30301 263 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 PBX1P40424 430 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 PRKCIP41743 596 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 IL10RBQ08334 325 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 VAC14Q08AM6 782 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 KLHL30Q0D2K2 578 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 RALGDSQ12967 914 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 EIF3IQ13347 325 aaKnown RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 SPIDRQ14159 915 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 CRTC1Q6UUV9 634 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 LIPIQ6XZB0 460 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 RFX8Q6ZV50 586 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 CBARPQ8N350 705 aaPredicted RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 ZNF843Q8N446 348 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 ARL14Q8N4G2 192 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 LZTR1Q8N653 840 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 NAF1Q96HR8 494 aaKnown RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 WDR92Q96MX6 357 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 PSKH2Q96QS6 385 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 PEBP4Q96S96 227 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 SNRNP25Q9BV90 132 aaKnown RBP10.45□□□□□ -0.74
VPS4B-207ENST00000591519 RBSNQ9H1K0 784 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 HAUS4Q9H6D7 363 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 CPNE5Q9HCH3 593 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 GPATCH2LQ9NWQ4 482 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 GULP1Q9UBP9 304 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 APPL1Q9UKG1 709 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 DOLKQ9UPQ8 538 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 OR1A2Q9Y585 309 aa10.45□□□□□ -0.74
VPS4B-207ENST00000591519 UNC13CQ8NB66 2214 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 A0A1W2PQ67 120 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms