RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KYAT3Q6YP21 454 aaKnown RBP11.56□□□□□ -0.56
VMP1-211ENST00000591315 IQCHQ86VS3 1027 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 SYCE1Q8N0S2 351 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 ZNF567Q8N184 647 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 TXLNBQ8N3L3 684 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 LPCAT1Q8NF37 534 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 SETD7Q8WTS6 366 aaKnown RBP11.56□□□□□ -0.56
VMP1-211ENST00000591315 ASB12Q8WXK4 309 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 IMP4Q96G21 291 aaKnown RBP11.56□□□□□ -0.56
VMP1-211ENST00000591315 TEKT5Q96M29 485 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 TSGA10Q9BZW7 698 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 TCEAL2Q9H3H9 227 aaPredicted RBP11.56□□□□□ -0.56
VMP1-211ENST00000591315 PCDH9Q9HC56 1237 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 GPR27Q9NS67 375 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 UCKL1Q9NWZ5 548 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
VMP1-211ENST00000591315 ASXL3Q9C0F0 2248 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 A0A0J9YYE9 177 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 A6NNZ2 444 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 MIF4GDA9UHW6 222 aaKnown RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 FPGTO14772 594 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 KRT86O43790 486 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 CBFA2T3O75081 653 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 PMPCBO75439 489 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 HEXIM1O94992 359 aaKnown RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 TRBC1P01850 177 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 PCCBP05166 539 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 ELFN1P0C7U0 828 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 ETV3P41162 512 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 CCT8P50990 548 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 EIF3EP60228 445 aaKnown RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 POLR2LP62875 67 aaKnown RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 EIF2B5Q13144 721 aaKnown RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 PDE1CQ14123 709 aaPredicted RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 INPP5AQ14642 412 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 LRRC14Q15048 493 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 TCEA2Q15560 299 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 KCTD19Q17RG1 926 aaPredicted RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 N4BP2L1Q5TBK1 243 aaPredicted RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 MEI1Q5TIA1 1274 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 DBX2Q6ZNG2 339 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 Q6ZVL8 140 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 KANSL1Q7Z3B3 1105 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 NAXDQ8IW45 347 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 CBARPQ8N350 705 aaPredicted RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 UBL4BQ8N7F7 174 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 SAP25Q8TEE9 199 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 HTR3CQ8WXA8 447 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 ATG4AQ8WYN0 398 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 TADA1Q96BN2 335 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 SCRN2Q96FV2 425 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 OXNAD1Q96HP4 312 aaPredicted RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 COQ10AQ96MF6 247 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 MCCC1Q96RQ3 725 aaPredicted RBP11.55□□□□□ -0.56
VMP1-211ENST00000591315 TRIB3Q96RU7 358 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 GORASP1Q9BQQ3 440 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 SLC25A51Q9H1U9 297 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 CD84Q9UIB8 345 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 EFR3BQ9Y2G0 817 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 PPIL1Q9Y3C6 166 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 OR1A2Q9Y585 309 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 KNTC1P50748 2209 aa11.55□□□□□ -0.56
VMP1-211ENST00000591315 FRYQ5TBA9 3013 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
VMP1-211ENST00000591315 C1SP09871 688 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 ZNF883P0CG24 379 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 RBP3P10745 1247 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 MYF5P13349 255 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 CSRP1P21291 193 aaKnown RBP11.54□□□□□ -0.56
VMP1-211ENST00000591315 CES1P23141 567 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 EPHA8P29322 1005 aaPredicted RBP11.54□□□□□ -0.56
VMP1-211ENST00000591315 RXRGP48443 463 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 EPHB1P54762 984 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 OVGP1Q12889 678 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 KLF1Q13351 362 aaPredicted RBP11.54□□□□□ -0.56
VMP1-211ENST00000591315 OLIG2Q13516 323 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 CDKN3Q16667 212 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 LRRC66Q68CR7 880 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 KDELC1Q6UW63 502 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 ZNF662Q6ZS27 426 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 BZW1Q7L1Q6 419 aaKnown RBP11.54□□□□□ -0.56
VMP1-211ENST00000591315 PID1Q7Z2X4 250 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 REXO1L1PQ8IX06 675 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 RBFAQ8N0V3 343 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 SLC25A45Q8N413 288 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 DENND6BQ8NEG7 585 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 SKA1Q96BD8 255 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 PDLIM2Q96JY6 352 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 ERVMER34-1Q9H9K5 563 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 USP29Q9HBJ7 922 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 DNAJC28Q9NX36 388 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 KLHL8Q9P2G9 620 aaPredicted RBP11.54□□□□□ -0.56
VMP1-211ENST00000591315 PCOLCE2Q9UKZ9 415 aa11.54□□□□□ -0.56
VMP1-211ENST00000591315 SPTY2D1-AS1A0A0U1RR47 76 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 HACD1B0YJ81 288 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 KCNN4O15554 427 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 PCDHGA12O60330 932 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 TJP3O95049 919 aa11.53□□□□□ -0.56
VMP1-211ENST00000591315 CLDN7O95471 211 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms