RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 NDUFAF2Q8N183 169 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
DNMT1-223ENST00000591239 SLC25A45Q8N413 288 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 EID2Q8N6I1 236 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 TFB1MQ8WVM0 346 aaKnown RBP9.22□□□□□ -0.93
DNMT1-223ENST00000591239 ALG3Q92685 438 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 HAUS1Q96CS2 278 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 AGAP3Q96P47 875 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 MCCC1Q96RQ3 725 aaPredicted RBP9.22□□□□□ -0.93
DNMT1-223ENST00000591239 HEMGNQ9BXL5 484 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CEP41Q9BYV8 373 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CAAP1Q9H8G2 361 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 UCKL1Q9NWZ5 548 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 FTSJ1Q9UET6 329 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 AMFRQ9UKV5 643 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 CHKBQ9Y259 395 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 EFR3BQ9Y2G0 817 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 BPTFQ12830 3046 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 LRRK1Q38SD2 2015 aa9.22□□□□□ -0.93
DNMT1-223ENST00000591239 A0A0J9YYE9 177 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 NPIPB15A6NHN6 443 aaPredicted RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 APOC4-APOC2K7ER74 178 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 ARHGAP6O43182 974 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PIAS2O75928 621 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 HEXIM1O94992 359 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 TRIM16O95361 564 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 LDOC1O95751 146 aaPredicted RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PRLP01236 227 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 TRBC1P01850 177 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 APOC2P02655 101 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PCCBP05166 539 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 ALPIP09923 528 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 ATXN1LP0C7T5 689 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 FTH1P19P0C7X4 201 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PYGMP11217 842 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 CYP2A6P11509 494 aaPredicted RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 NME1P15531 152 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 GM2AP17900 193 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 LHCGRP22888 699 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PTPN7P35236 360 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 HNF1BP35680 557 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 EPHB1P54762 984 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 RPL26P61254 145 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 SKOR1P84550 965 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 SHC2P98077 582 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 FOXC1Q12948 553 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 EIF2B5Q13144 721 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 MTM1Q13496 603 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 ARHGEF7Q14155 803 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 TEX44Q53QW1 395 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 DENND2CQ68D51 928 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 MACC1Q6ZN28 852 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 BBS12Q6ZW61 710 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 TSPAN33Q86UF1 283 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 SLCO6A1Q86UG4 719 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 ZC3H18Q86VM9 953 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 LRRC8AQ8IWT6 810 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 RNF10Q8N5U6 811 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 UBL4BQ8N7F7 174 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PNPLA1Q8N8W4 532 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PLA2G15Q8NCC3 412 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 CCDC112Q8NEF3 446 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 IMP4Q96G21 291 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 COQ10AQ96MF6 247 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PHF12Q96QT6 1004 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 RBM15Q96T37 977 aaKnown RBP eCLIP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 HERPUD2Q9BSE4 406 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 APOOQ9BUR5 198 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 TDRD1Q9BXT4 1180 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 OSBPL8Q9BZF1 889 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 SLC25A51Q9H1U9 297 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 PCDH9Q9HC56 1237 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 TOR4AQ9NXH8 423 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 KLF15Q9UIH9 416 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 ANGPTL2Q9UKU9 493 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 RPL26L1Q9UNX3 145 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 WASF3Q9UPY6 502 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 APOBEC2Q9Y235 224 aaKnown RBP9.21□□□□□ -0.94
DNMT1-223ENST00000591239 OR1A2Q9Y585 309 aa9.21□□□□□ -0.94
DNMT1-223ENST00000591239 CHD8Q9HCK8 2581 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 ARID1BQ8NFD5 2236 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 A0A0U1RQS6 177 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 NEMP2A6NFY4 417 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 MIF4GDA9UHW6 222 aaKnown RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 HACD1B0YJ81 288 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 ANKRD66B4E2M5 251 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 H3BM21 787 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 PSMD11O00231 422 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 TRIM38O00635 465 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 ENC1O14682 589 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 SCAMP1O15126 338 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 MTSS1O43312 755 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 KRT86O43790 486 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 HYAL3O43820 417 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 FTCDO95954 541 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 TOP3BO95985 862 aaKnown RBP9.2□□□□□ -0.94
DNMT1-223ENST00000591239 JUNDP17535 347 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 PTPN3P26045 913 aa9.2□□□□□ -0.94
DNMT1-223ENST00000591239 HTR1BP28222 390 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms