RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 HOXD9P28356 352 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 PMLP29590 882 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ABL2P42684 1182 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 NFKB2Q00653 900 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 SULT2A1Q06520 285 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ART3Q13508 389 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 MAPRE2Q15555 327 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 DEFB115Q30KQ5 88 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 CHST9Q7L1S5 443 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 CUZD1Q86UP6 607 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 HPS6Q86YV9 775 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 DSELQ8IZU8 1212 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 CRIPAKQ8N1N5 446 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ANKRD49Q8WVL7 239 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 L3HYPDHQ96EM0 354 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 DDX50Q9BQ39 737 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 SPON2Q9BUD6 331 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 MEAF6Q9HAF1 191 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 STK39Q9UEW8 545 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 PPM1HQ9ULR3 514 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ARL5AQ9Y689 179 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 PCNTO95613 3336 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 OR51F1A6NGY5 319 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 CCL22O00626 93 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 SP100P23497 879 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ALDH7A1P49419 539 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 DSG1Q02413 1049 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ZNF177Q13360 481 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 PEX6Q13608 980 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 GALNT3Q14435 633 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 GPR158Q5T848 1215 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 BNC2Q6ZN30 1099 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 RAB44Q7Z6P3 723 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 DHDDSQ86SQ9 333 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ISCA2Q86U28 154 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 LDB1Q86U70 411 aaPredicted RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 PGAM4Q8N0Y7 254 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 OR7D4Q8NG98 312 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 CCDC124Q96CT7 223 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 TRIB3Q96RU7 358 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 ALG9Q9H6U8 611 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 TRPM5Q9NZQ8 1165 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 HSFX1Q9UBD0 423 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 HCSTQ9UBK5 93 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 CRYL1Q9Y2S2 319 aa19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 COPG1Q9Y678 874 aaKnown RBP19.2■□□□□ 0.66
PRKCSH-209ENST00000589838 A0A0D9SEW6 157 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 ZNF840PA6NDX5 716 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 OR1D2P34982 312 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 SUOXP51687 545 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 PRMT2P55345 433 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 FAM136AQ96C01 138 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 MIEF2Q96C03 454 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 PHF21BQ96EK2 531 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 SUDS3Q9H7L9 328 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 CREBZFQ9NS37 354 aa19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 NLE1Q9NVX2 485 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-209ENST00000589838 INSIG1O15503 277 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 PARNO95453 639 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 SLC4A1P02730 911 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 JUNP05412 331 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 RHOCP08134 193 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 HSPA1AP0DMV8 641 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 HSPA1BP0DMV9 641 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 KCNA5P22460 613 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 INHBCP55103 352 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TCHHL1Q5QJ38 904 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TMEM198Q66K66 360 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TMEM207Q6UWW9 146 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 CHSY3Q70JA7 882 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TMEM173Q86WV6 379 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 DENND1CQ8IV53 801 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 APLFQ8IW19 511 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 PELI3Q8N2H9 469 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 MICAL1Q8TDZ2 1067 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 PYDC1Q8WXC3 89 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 RCN3Q96D15 328 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 CDKN2AIPNLQ96HQ2 116 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TCF12Q99081 682 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 SYTL2Q9HCH5 934 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 SCUBE2Q9NQ36 999 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 AFF4Q9UHB7 1163 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TMEM233B4DJY2 109 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 H3BNC9 293 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 PFDN6O15212 129 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 GPC4O75487 556 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 SMNDC1O75940 238 aaKnown RBP eCLIP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 CD1DP15813 335 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 STC1P52823 247 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 XIAPP98170 497 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 STX5Q13190 355 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 SQLEQ14534 574 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TAF1AQ15573 450 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 GSTA3Q16772 222 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 TYSND1Q2T9J0 566 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 PPM1LQ5SGD2 360 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 KIAA1841Q6NSI8 718 aa19.18■□□□□ 0.66
PRKCSH-209ENST00000589838 AFTPHQ6ULP2 937 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms