RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 RTL3Q8N8U3 475 aaKnown RBP15.33■□□□□ 0.04
IFT20-216ENST00000588477 JOSD2Q8TAC2 188 aa15.33■□□□□ 0.04
IFT20-216ENST00000588477 C9orf43Q8TAL5 461 aaPredicted RBP15.33■□□□□ 0.04
IFT20-216ENST00000588477 ZNF641Q96N77 438 aaPredicted RBP15.33■□□□□ 0.04
IFT20-216ENST00000588477 PSMG3-AS1Q96PY0 264 aa15.33■□□□□ 0.04
IFT20-216ENST00000588477 RWDD2AQ9UIY3 292 aa15.33■□□□□ 0.04
IFT20-216ENST00000588477 ICE1Q9Y2F5 2266 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 BLACEA4D250 179 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 NKX2-8O15522 239 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 RAD1O60671 282 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 ECEL1O95672 775 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 LSM8O95777 96 aaKnown RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 HOXC4P09017 264 aaPredicted RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 CCNB1P14635 433 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 MPSTP25325 297 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 EPHB2P29323 1055 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 CSTF2P33240 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
IFT20-216ENST00000588477 TRIM23P36406 574 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 STAT1P42224 750 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 HDAC4P56524 1084 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 YBEYP58557 167 aaPredicted RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 RALGDSQ12967 914 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 BIRC2Q13490 618 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 NR1D2Q14995 579 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 CLPPQ16740 277 aaPredicted RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 TSR1Q2NL82 804 aaKnown RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 NKAIN2Q5VXU1 208 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 DPY19L2P1Q6NXN4 242 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 LIPIQ6XZB0 460 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 STRADAQ7RTN6 431 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 C17orf82Q86X59 251 aaPredicted RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 NRROSQ86YC3 692 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 PELI3Q8N2H9 469 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 AGBL5Q8NDL9 886 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 CCDC112Q8NEF3 446 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 FAM172AQ8WUF8 416 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 PATE1Q8WXA2 126 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 CARS2Q9HA77 564 aaKnown RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 OCIAD1Q9NX40 245 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 SLC39A1Q9NY26 324 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 UBA2Q9UBT2 640 aaPredicted RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 PLAAQ9Y263 795 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
IFT20-216ENST00000588477 USP9YO00507 2555 aaPredicted RBP15.32■□□□□ 0.04
IFT20-216ENST00000588477 CFAP69A5D8W1 941 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 C2CD4BA6NLJ0 364 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 A8MX80 341 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 DUX1O43812 170 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 ELFN1P0C7U0 828 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 PRKAR1AP10644 381 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 AK4P27144 223 aaPredicted RBP15.31■□□□□ 0.04
IFT20-216ENST00000588477 PTPN9P43378 593 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 TRA2AQ13595 282 aaKnown RBP eCLIP15.31■□□□□ 0.04
IFT20-216ENST00000588477 PNCKQ6P2M8 343 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 SLFN11Q7Z7L1 901 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 NRSN1Q8IZ57 195 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 OR4D9Q8NGE8 314 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 CENPIQ92674 756 aaPredicted RBP15.31■□□□□ 0.04
IFT20-216ENST00000588477 ABHD17AQ96GS6 310 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 SLC45A3Q96JT2 553 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 DDA1Q9BW61 102 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 GSDMCQ9BYG8 508 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 ASPSCR1Q9BZE9 553 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 WDR26Q9H7D7 661 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 LRRC4CQ9HCJ2 640 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 TAAR2Q9P1P5 351 aa15.31■□□□□ 0.04
IFT20-216ENST00000588477 EFCAB7A8K855 629 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 J3KR12 359 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 PDE2AO00408 941 aaPredicted RBP15.3■□□□□ 0.04
IFT20-216ENST00000588477 PPM1DO15297 605 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 CAPN5O15484 640 aaPredicted RBP15.3■□□□□ 0.04
IFT20-216ENST00000588477 CREB3O43889 395 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 FUCA1P04066 466 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 GM2AP17900 193 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 GPR3P46089 330 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 ILF3Q12906 894 aaKnown RBP eCLIP15.3■□□□□ 0.04
IFT20-216ENST00000588477 ACOX1Q15067 660 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 MAN2A1Q16706 1144 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 PARP15Q460N3 678 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 DCAF12Q5T6F0 453 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 SRLQ86TD4 932 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 FAM129CQ86XR2 697 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 NAGSQ8N159 534 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 PAF1Q8N7H5 531 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 NTAN1Q96AB6 310 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 TUBGCP5Q96RT8 1024 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 SPENQ96T58 3664 aaKnown RBP15.3■□□□□ 0.04
IFT20-216ENST00000588477 NDST4Q9H3R1 872 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 GPN2Q9H9Y4 310 aaPredicted RBP15.3■□□□□ 0.04
IFT20-216ENST00000588477 TMEM9Q9P0T7 183 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 PILRAQ9UKJ1 303 aa15.3■□□□□ 0.04
IFT20-216ENST00000588477 TNRC6AQ8NDV7 1962 aaKnown RBP15.29■□□□□ 0.04
IFT20-216ENST00000588477 ZNF106Q9H2Y7 1883 aaKnown RBP15.29■□□□□ 0.04
IFT20-216ENST00000588477 IGHV1OR21-1A0A087WYE8 117 aa15.29■□□□□ 0.04
IFT20-216ENST00000588477 LOC101059948A0A1B0GTJ6 334 aa15.29■□□□□ 0.04
IFT20-216ENST00000588477 THRAP10827 490 aa15.29■□□□□ 0.04
IFT20-216ENST00000588477 MYCLP1P12525 358 aaPredicted RBP15.29■□□□□ 0.04
IFT20-216ENST00000588477 SERPINA4P29622 427 aa15.29■□□□□ 0.04
IFT20-216ENST00000588477 RGRP47804 291 aa15.29■□□□□ 0.04
IFT20-216ENST00000588477 CDC20Q12834 499 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms