RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ZNF487B1APH4 448 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 LMO7DNF2Z398 122 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 APOL1O14791 398 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 GCATO75600 419 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 HEXIM1O94992 359 aaKnown RBP19.6■□□□□ 0.73
TPM4-208ENST00000588410 ALPIP09923 528 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 TSHRP16473 764 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 ZFXP17010 805 aaPredicted RBP19.6■□□□□ 0.73
TPM4-208ENST00000588410 CA4P22748 312 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 HK3P52790 923 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 EPHB1P54762 984 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 CAMK2BQ13554 666 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 TCEAL1Q15170 157 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 NR0B2Q15466 257 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 CNGA3Q16281 694 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 ALG11Q2TAA5 492 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 VSIG1Q86XK7 387 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 PROSER1Q86XN7 944 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 RFX6Q8HWS3 928 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 TPCN2Q8NHX9 752 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 LRRN4Q8WUT4 740 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 HDAC11Q96DB2 347 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 NUS1Q96E22 293 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 SCRN2Q96FV2 425 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 COQ10AQ96MF6 247 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 WDR26Q9H7D7 661 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 PNMA8BQ9ULN7 279 aaPredicted RBP19.6■□□□□ 0.73
TPM4-208ENST00000588410 CLCA2Q9UQC9 943 aa19.6■□□□□ 0.73
TPM4-208ENST00000588410 CPED1A4D0V7 1026 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 TNFP01375 233 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 GP1BAP07359 652 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 CTPS1P17812 591 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 COMTP21964 271 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 CYLC1P35663 651 aaPredicted RBP19.59■□□□□ 0.73
TPM4-208ENST00000588410 ZNF75DP51815 510 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 KIAA1024LP59773 190 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 INSM1Q01101 510 aaPredicted RBP19.59■□□□□ 0.73
TPM4-208ENST00000588410 DSC2Q02487 901 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 CYP4F3Q08477 520 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 SLC10A2Q12908 348 aaPredicted RBP19.59■□□□□ 0.73
TPM4-208ENST00000588410 CDKN3Q16667 212 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 ESRP1Q6NXG1 681 aaKnown RBP19.59■□□□□ 0.73
TPM4-208ENST00000588410 CCDC170Q8IYT3 715 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 IFI44Q8TCB0 444 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 FUBP1Q96AE4 644 aaKnown RBP19.59■□□□□ 0.73
TPM4-208ENST00000588410 RNF25Q96BH1 459 aaPredicted RBP19.59■□□□□ 0.73
TPM4-208ENST00000588410 RBSNQ9H1K0 784 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 HYOU1Q9Y4L1 999 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 TRPM6Q9BX84 2022 aa19.59■□□□□ 0.73
TPM4-208ENST00000588410 LY6G6EA0A0G2JKS1 128 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 NPIPB15A6NHN6 443 aaPredicted RBP19.58■□□□□ 0.72
TPM4-208ENST00000588410 PDE2AO00408 941 aaPredicted RBP19.58■□□□□ 0.72
TPM4-208ENST00000588410 YY2O15391 372 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 OPA1O60313 960 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 MT-CO3P00414 261 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 JCHAINP01591 159 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 CAPNS1P04632 268 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 PDK1Q15118 436 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 C6orf132Q5T0Z8 1188 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 SLC9A4Q6AI14 798 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 PNCKQ6P2M8 343 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 EFL1Q7Z2Z2 1120 aaKnown RBP19.58■□□□□ 0.72
TPM4-208ENST00000588410 GKN2Q86XP6 184 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 CACTIN-AS1Q8N1I8 211 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 PLD5Q8N7P1 536 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 OR56A4Q8NGH8 313 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 MAPK15Q8TD08 544 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 PIH1D2Q8WWB5 315 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 NXPE2Q96DL1 559 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 MRFAP1L1Q96HT8 127 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 MCCC1Q96RQ3 725 aaPredicted RBP19.58■□□□□ 0.72
TPM4-208ENST00000588410 LGMNQ99538 433 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 CLPBQ9H078 707 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 MOSPD1Q9UJG1 213 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 PCDHA13Q9Y5I0 950 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 U3KQA8 63 aa19.58■□□□□ 0.72
TPM4-208ENST00000588410 MAP1BP46821 2468 aaKnown RBP19.57■□□□□ 0.72
TPM4-208ENST00000588410 GOLGA6CA6NDK9 693 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 GOLGA6BA6NDN3 693 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 C3orf70A6NLC5 250 aaPredicted RBP19.57■□□□□ 0.72
TPM4-208ENST00000588410 PSMD11O00231 422 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 HLA-DQB2P05538 268 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 PDHA1P08559 390 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 HOXC4P09017 264 aaPredicted RBP19.57■□□□□ 0.72
TPM4-208ENST00000588410 GOLGA6DP0CG33 693 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 GM2AP17900 193 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 TRIM23P36406 574 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 ETV3P41162 512 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 PPIDQ08752 370 aaKnown RBP19.57■□□□□ 0.72
TPM4-208ENST00000588410 AP1B1Q10567 949 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 TCEA2Q15560 299 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 ALG1LQ6GMV1 187 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 LVRNQ6Q4G3 990 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 HSD11B1LQ7Z5J1 315 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 SDR16C5Q8N3Y7 309 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 DTD2Q96FN9 168 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 BOCQ9BWV1 1114 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 PHPT1Q9NRX4 125 aaPredicted RBP19.57■□□□□ 0.72
TPM4-208ENST00000588410 GOLGA6AQ9NYA3 693 aa19.57■□□□□ 0.72
TPM4-208ENST00000588410 DKK4Q9UBT3 224 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms