RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 LSM14AQ8ND56 463 aaKnown RBP17■□□□□ 0.31
TMED1-203ENST00000588259 HSPH1Q92598 858 aa17■□□□□ 0.31
TMED1-203ENST00000588259 FUBP1Q96AE4 644 aaKnown RBP17■□□□□ 0.31
TMED1-203ENST00000588259 TRIM11Q96F44 468 aa17■□□□□ 0.31
TMED1-203ENST00000588259 PRR11Q96HE9 360 aaPredicted RBP17■□□□□ 0.31
TMED1-203ENST00000588259 RBM15Q96T37 977 aaKnown RBP eCLIP17■□□□□ 0.31
TMED1-203ENST00000588259 CYP4F12Q9HCS2 524 aa17■□□□□ 0.31
TMED1-203ENST00000588259 MRPL40Q9NQ50 206 aaKnown RBP17■□□□□ 0.31
TMED1-203ENST00000588259 GOLGA6AQ9NYA3 693 aa17■□□□□ 0.31
TMED1-203ENST00000588259 ZNF462Q96JM2 2506 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 SMTNL1A8MU46 457 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 CDRT15L2A8MXV6 281 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 DDX3XO00571 662 aaKnown RBP eCLIP16.99■□□□□ 0.313e-8■■■■□ 25.2
TMED1-203ENST00000588259 NTN3O00634 580 aaPredicted RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 ZIC2O95409 532 aaPredicted RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 ITGA2BP08514 1039 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 ZNF135P52742 658 aaPredicted RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 SLC10A7Q0GE19 358 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 DPYSQ14117 519 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 AGERQ15109 404 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 TDRD12Q587J7 1177 aaKnown RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 E4F1Q66K89 784 aaPredicted RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 TMCO3Q6UWJ1 677 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 CYP4V2Q6ZWL3 525 aaPredicted RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 RAB11FIP2Q7L804 512 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 PSTKQ8IV42 348 aaKnown RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 ZNF843Q8N446 348 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 LZTR1Q8N653 840 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 OR6C4Q8NGE1 309 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 FNIP1Q8TF40 1166 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 ECHDC3Q96DC8 303 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 NUS1Q96E22 293 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 LIN37Q96GY3 246 aaPredicted RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 PSKH2Q96QS6 385 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 TMEM168Q9H0V1 697 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 LRRN3Q9H3W5 708 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 DPEP2Q9H4A9 486 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 MRPL47Q9HD33 250 aaKnown RBP16.99■□□□□ 0.31
TMED1-203ENST00000588259 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.99■□□□□ 0.31
TMED1-203ENST00000588259 B4GALT6Q9UBX8 382 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 DGKBQ9Y6T7 804 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 AHCTF1Q8WYP5 2266 aa16.99■□□□□ 0.31
TMED1-203ENST00000588259 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.98■□□□□ 0.31
TMED1-203ENST00000588259 CFAP69A5D8W1 941 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 TMX2-CTNND1H3BSU7 103 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 CPP00450 1065 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 JMJD7P0C870 316 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 MYBL1P10243 752 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 GZMAP12544 262 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 SKILP12757 684 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 HGFP14210 728 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 AMPD1P23109 780 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 MLLT3P42568 568 aaPredicted RBP16.98■□□□□ 0.31
TMED1-203ENST00000588259 NSUN2Q08J23 767 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMED1-203ENST00000588259 ARHGEF7Q14155 803 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 ZNF605Q86T29 641 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 BBS5Q8N3I7 341 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 ATPAF2Q8N5M1 289 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 NSMCE1Q8WV22 266 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 TMEM74Q96NL1 305 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 PISDQ9UG56 409 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 PCDHGC4Q9Y5F7 938 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 COL6A6A6NMZ7 2263 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 ATMQ13315 3056 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 CFAP46Q8IYW2 2715 aa16.98■□□□□ 0.31
TMED1-203ENST00000588259 A0A1W2PQM1 296 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 PRSS38A1L453 326 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 PDE2AO00408 941 aaPredicted RBP16.97■□□□□ 0.31
TMED1-203ENST00000588259 TRAFD1O14545 582 aaPredicted RBP16.97■□□□□ 0.31
TMED1-203ENST00000588259 SERPINC1P01008 464 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 NFKBIAP25963 317 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 UGT1A5P35504 534 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 HCAR3P49019 387 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 CLN3Q13286 438 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 EIF3IQ13347 325 aaKnown RBP16.97■□□□□ 0.31
TMED1-203ENST00000588259 BIRC2Q13490 618 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 C14orf28Q4W4Y0 310 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 CERCAMQ5T4B2 595 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 KIAA1614Q5VZ46 1190 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 SPECC1LQ69YQ0 1117 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 PNCKQ6P2M8 343 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 PCSK4Q6UW60 755 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 CCDC81Q6ZN84 652 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 CLEC14AQ86T13 490 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 SFTPA2Q8IWL1 248 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 ZNF599Q96NL3 588 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 LGR4Q9BXB1 951 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 CARS2Q9HA77 564 aaKnown RBP16.97■□□□□ 0.31
TMED1-203ENST00000588259 PHPT1Q9NRX4 125 aaPredicted RBP16.97■□□□□ 0.31
TMED1-203ENST00000588259 AIPL1Q9NZN9 384 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
TMED1-203ENST00000588259 ATXN7L1Q9ULK2 861 aaPredicted RBP16.97■□□□□ 0.31
TMED1-203ENST00000588259 A0A1W2PQC6 194 aa16.96■□□□□ 0.31
TMED1-203ENST00000588259 TNFRSF10CO14798 259 aa16.96■□□□□ 0.31
TMED1-203ENST00000588259 SOCS5O75159 536 aa16.96■□□□□ 0.31
TMED1-203ENST00000588259 MYCLP1P12525 358 aaPredicted RBP16.96■□□□□ 0.31
TMED1-203ENST00000588259 TCF4P15884 667 aa16.96■□□□□ 0.31
TMED1-203ENST00000588259 GLB1P16278 677 aa16.96■□□□□ 0.31
TMED1-203ENST00000588259 IL1R2P27930 398 aa16.96■□□□□ 0.31
TMED1-203ENST00000588259 SLC5A2P31639 672 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms