RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 OGFOD3Q6PK18 319 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 FAM129CQ86XR2 697 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 NRSN1Q8IZ57 195 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 UNC5BQ8IZJ1 945 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 OR56A4Q8NGH8 313 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 CCL4L1Q8NHW4 92 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 KIAA1524Q8TCG1 905 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 OR1E3Q8WZA6 343 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 VOPP1Q96AW1 172 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 SLC45A3Q96JT2 553 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 C1orf74Q96LT6 269 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 GDAP1L1Q96MZ0 367 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 HAPLN3Q96S86 360 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 TBCBQ99426 244 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 DDA1Q9BW61 102 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 TMEM168Q9H0V1 697 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 SUDS3Q9H7L9 328 aaPredicted RBP8.61□□□□□ -1.03
SDF2-204ENST00000587338 FGF22Q9HCT0 170 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 MRPL40Q9NQ50 206 aaKnown RBP8.61□□□□□ -1.03
SDF2-204ENST00000587338 FAM207AQ9NSI2 230 aaPredicted RBP8.61□□□□□ -1.03
SDF2-204ENST00000587338 IGSF5Q9NSI5 407 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 SLC39A1Q9NY26 324 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 RRN3Q9NYV6 651 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.61□□□□□ -1.03
SDF2-204ENST00000587338 HPCAL4Q9UM19 191 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 DGKBQ9Y6T7 804 aa8.61□□□□□ -1.03
SDF2-204ENST00000587338 FAM170AA1A519 330 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 A1L4Q6 167 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 TMEM202A6NGA9 273 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 CACNB4O00305 520 aaPredicted RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 CAPN5O15484 640 aaPredicted RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 B4GAT1O43505 415 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 VPS4BO75351 444 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 TMCC1O94876 653 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 IGSF6O95976 241 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 TIMP2P16035 220 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 SLC9A1P19634 815 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 GNLYP22749 145 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 MPSTP25325 297 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 OAS2P29728 719 aaKnown RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 CASP14P31944 242 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 CSTF2P33240 577 aaKnown RBP eCLIP8.6□□□□□ -1.032e-9■■■■□ 26.3
SDF2-204ENST00000587338 PBX1P40424 430 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 SNX16P57768 344 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 RAD51Q06609 339 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 BIRC2Q13490 618 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 TRIM14Q14142 442 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 TMEM52BQ4KMG9 183 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 ARTNQ5T4W7 220 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 ACBD5Q5T8D3 534 aaPredicted RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 ATP1A1-AS1Q5TC04 95 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 FHL5Q5TD97 284 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 RWDD4Q6NW29 188 aaKnown RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 GJB7Q6PEY0 223 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 ZNF354CQ86Y25 554 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 TEX19Q8NA77 164 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 NETO2Q8NC67 525 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 PLA2G15Q8NCC3 412 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 AGBL5Q8NDL9 886 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 ZNF397Q8NF99 534 aaPredicted RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 SSC4DQ8WTU2 575 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 PGAP3Q96FM1 320 aaPredicted RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 ERGIC2Q96RQ1 377 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 NCAPGQ9BPX3 1015 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 ASPSCR1Q9BZE9 553 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 CYP4F12Q9HCS2 524 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 DNAI1Q9UI46 699 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 MOSPD1Q9UJG1 213 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 VPS4AQ9UN37 437 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 LUC7L2Q9Y383 392 aaKnown RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 ARHGEF17Q96PE2 2063 aaPredicted RBP8.6□□□□□ -1.03
SDF2-204ENST00000587338 OTOGQ6ZRI0 2925 aa8.6□□□□□ -1.03
SDF2-204ENST00000587338 DOCK4Q8N1I0 1966 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 LOC101059948A0A1B0GTJ6 334 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 CXorf51AA0A1B0GTR3 108 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 EFCAB7A8K855 629 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 ZW10O43264 779 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 BUB1O43683 1085 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 PIGNO95427 931 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 GYPCP04921 128 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 KELP23276 732 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 CD1CP29017 333 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 KRT9P35527 623 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 PPM1FP49593 454 aaPredicted RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 LIG3P49916 1009 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 LIMK2P53671 638 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 KIAA1024LP59773 190 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 POLR2FP61218 127 aaKnown RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 RHOAP61586 193 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 TBX2Q13207 712 aaPredicted RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 MTM1Q13496 603 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 TRA2AQ13595 282 aaKnown RBP eCLIP8.59□□□□□ -1.03
SDF2-204ENST00000587338 CLPPQ16740 277 aaPredicted RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 SLC25A52Q3SY17 297 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 DCAF12Q5T6F0 453 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 FAM102AQ5T9C2 384 aaPredicted RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 NKAIN2Q5VXU1 208 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms