RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 A0A1B0GTW7 788 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 H6PDO95479 791 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 ODC1P11926 461 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 SERPINH1P50454 418 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 TRIM32Q13049 653 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 CLEC6AQ6EIG7 209 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 LAYNQ6UX15 382 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 GALNT7Q86SF2 657 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 RTL3Q8N8U3 475 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 PNPLA1Q8N8W4 532 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 DRAXINQ8NBI3 349 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 SMOC2Q9H3U7 446 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 OSER1Q9NX31 292 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 MPP6Q9NZW5 540 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 THEGQ9P2T0 379 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 CEPT1Q9Y6K0 416 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 ATP6AP2A0A1C7CYW4 349 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 E9PAM4 449 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 H3BSA7 217 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 ATP6AP2O75787 350 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 SRP72O76094 671 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 CDH2P19022 906 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 FGFR3P22607 806 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC26A3P40879 764 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 KCNC1P48547 511 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 ATP4BP51164 291 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 ZNF678Q5SXM1 525 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 HMBOX1Q6NT76 420 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 TMEM207Q6UWW9 146 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 ISCA2Q86U28 154 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 LRRTM3Q86VH5 581 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 DHFR2Q86XF0 187 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 CASP10Q92851 521 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 L3HYPDHQ96EM0 354 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 IMP4Q96G21 291 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 ZIC5Q96T25 663 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 PKMYT1Q99640 499 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 CIB1Q99828 191 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 TMEM79Q9BSE2 394 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 PHF24Q9UPV7 400 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 GIT1Q9Y2X7 761 aa16.91■□□□□ 0.3
PRKCSH-205ENST00000587327 MGEA5O60502 916 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 ADAMTS4O75173 837 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 SUPT7LO94864 414 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 PAPSS2O95340 614 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 WISP3O95389 354 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 PEX11BO96011 259 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 ZNF23P17027 643 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC5A2P31639 672 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 PGFP49763 221 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC7A2P52569 658 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 CDKN2DP55273 166 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 IRAK1BP1Q5VVH5 260 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 MFSD14CQ5VZR4 134 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 MRPL10Q7Z7H8 261 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 METTL23Q86XA0 190 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 FUNDC1Q8IVP5 155 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 MYO1HQ8N1T3 1032 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 FAM81AQ8TBF8 368 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 ROPN1LQ96C74 230 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 ALG9Q9H6U8 611 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 FBRSL1Q9HCM7 1045 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 HSFX1Q9UBD0 423 aa16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 MTF2Q9Y483 593 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 NYNRINQ9P2P1 1898 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC7A4O43246 635 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 MT-CO1P00395 513 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 HSPA8P11142 646 aaKnown RBP16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 TSPAN8P19075 237 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 PCSK6P29122 969 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 NKX3-2P78367 333 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 UGT3A2Q3SY77 523 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 GPR158Q5T848 1215 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 C14orf80Q86SX3 495 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 TRIML2Q8N7C3 387 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 PPWD1Q96BP3 646 aaKnown RBP16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 C19orf60Q96EN9 201 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 CCT7Q99832 543 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC39A3Q9BRY0 314 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 NOL6Q9H6R4 1146 aaKnown RBP16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 OLAHQ9NV23 265 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 CNOT6Q9ULM6 557 aaKnown RBP16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 HS3ST4Q9Y661 456 aa16.89■□□□□ 0.3
PRKCSH-205ENST00000587327 H3BNH8 94 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 B3GAT3O94766 335 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 S1PR4O95977 384 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 BMP2P12643 396 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 GPX3P22352 226 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 CD52P31358 61 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 RENBPP51606 427 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 STX1BP61266 288 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 SREBF2Q12772 1141 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 FAM219BQ5XKK7 198 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 ZBTB49Q6ZSB9 765 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 ANKFN1Q8N957 763 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 PCYOX1LQ8NBM8 494 aa16.89■□□□□ 0.29
PRKCSH-205ENST00000587327 OR10T2Q8NGX3 314 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms