RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SRLQ86TD4 932 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 SPOCK2Q92563 424 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 PTPRN2Q92932 1015 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 NXPE3Q969Y0 559 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 GPR22Q99680 433 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 VPS11Q9H270 941 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 FGFR1OP2Q9NVK5 253 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 FBXO10Q9UK96 956 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 BPTFQ12830 3046 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 SLC7A4O43246 635 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 FZD6O60353 706 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 CISD3P0C7P0 127 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 CTSOP43234 321 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-204ENST00000586417 SERPINB8P50452 374 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 AP1S1P61966 158 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 LAMB3Q13751 1172 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 GRM3Q14832 879 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 UGP2Q16851 508 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 ZNF557Q8N988 423 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-204ENST00000586417 LPCAT1Q8NF37 534 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 RMDN1Q96DB5 314 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 TM6SF2Q9BZW4 377 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 IQCGQ9H095 443 aaKnown RBP20.51■□□□□ 0.87
ATG4D-204ENST00000586417 MFSD1Q9H3U5 465 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 F5P12259 2224 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 KIAA1549LQ6ZVL6 1849 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 CCL22O00626 93 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 TYK2P29597 1187 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 OPRD1P41143 372 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 SLC20A2Q08357 652 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 PTPRCAPQ14761 206 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 PPM1JQ5JR12 505 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 PIGWQ7Z7B1 504 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 METTL3Q86U44 580 aaKnown RBP20.5■□□□□ 0.87
ATG4D-204ENST00000586417 HDAC10Q969S8 669 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 DNAJC1Q96KC8 554 aaKnown RBP20.5■□□□□ 0.87
ATG4D-204ENST00000586417 SMIM14Q96QK8 99 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 CAB39LQ9H9S4 337 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 GGA2Q9UJY4 613 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 FBXO5Q9UKT4 447 aa20.5■□□□□ 0.87
ATG4D-204ENST00000586417 AURKAO14965 403 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 SERPINB4P48594 390 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 CSNK1DP48730 415 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 ZKSCAN8Q15776 578 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-204ENST00000586417 GEN1Q17RS7 908 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 TMEM215Q68D42 235 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 KIAA0408Q6ZU52 694 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 SFTPA1Q8IWL2 248 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 MDGA1Q8NFP4 955 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 OR13C4Q8NGS5 318 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 ZNF75CPQ92670 426 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-204ENST00000586417 EMCNQ9ULC0 261 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 HS3ST2Q9Y278 367 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 WDR91A4D1P6 747 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 ANKRD66B4E2M5 251 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 BUD23O43709 281 aaKnown RBP20.49■□□□□ 0.87
ATG4D-204ENST00000586417 GLRA3O75311 464 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 SRCP12931 536 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 PSMA3P25788 255 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 GMPRP36959 345 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 HADHAP40939 763 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 DGKGP49619 791 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 STK19P49842 368 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-204ENST00000586417 ZNF140P52738 457 aaPredicted RBP20.49■□□□□ 0.87
ATG4D-204ENST00000586417 DLG2Q15700 870 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 DGKKQ5KSL6 1271 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 CALML6Q8TD86 181 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 LRRC8CQ8TDW0 803 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 CSGALNACT1Q8TDX6 532 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 STYXQ8WUJ0 223 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 VOPP1Q96AW1 172 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 SEC16BQ96JE7 1060 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 TBATAQ96M53 351 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 ADGRE3Q9BY15 652 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 SLC2A11Q9BYW1 496 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 NSRP1Q9H0G5 558 aaKnown RBP20.49■□□□□ 0.87
ATG4D-204ENST00000586417 HEBP1Q9NRV9 189 aa20.49■□□□□ 0.87
ATG4D-204ENST00000586417 RPP40O75818 363 aaKnown RBP20.48■□□□□ 0.87
ATG4D-204ENST00000586417 PABPC1P11940 636 aaKnown RBP20.48■□□□□ 0.87
ATG4D-204ENST00000586417 BMP1P13497 986 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 SLC8A1P32418 973 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 KDSRQ06136 332 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 TDGQ13569 410 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 GKAP1Q5VSY0 366 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-204ENST00000586417 CGB2Q6NT52 195 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 KIAA0907Q7Z7F0 614 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-204ENST00000586417 GALNT7Q86SF2 657 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 ADIPOR2Q86V24 386 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 ARMC2Q8NEN0 867 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 OR6K2Q8NGY2 324 aa20.48■□□□□ 0.87
ATG4D-204ENST00000586417 RPL10LQ96L21 214 aaKnown RBP20.48■□□□□ 0.87
ATG4D-204ENST00000586417 FBRSL1Q9HCM7 1045 aaKnown RBP20.48■□□□□ 0.87
ATG4D-204ENST00000586417 EVLQ9UI08 416 aaPredicted RBP20.48■□□□□ 0.87
ATG4D-204ENST00000586417 OR51F1A6NGY5 319 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 HAUS5O94927 633 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 CRTAMO95727 393 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 CD151P48509 253 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 PRAMEP78395 509 aa20.47■□□□□ 0.87
ATG4D-204ENST00000586417 TAF1AQ15573 450 aaPredicted RBP20.47■□□□□ 0.87
ATG4D-204ENST00000586417 INSCQ1MX18 579 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms