RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-208ENST00000584052 CSNK1DP48730 415 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 PPM1FP49593 454 aaPredicted RBP15.21■□□□□ 0.03
RIOK3-208ENST00000584052 RENBPP51606 427 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 ZBED6P86452 979 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 KLHL30Q0D2K2 578 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 CLN3Q13286 438 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 PHF19Q5T6S3 580 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 DENND2CQ68D51 928 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 PCSK4Q6UW60 755 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 B3GNT8Q7Z7M8 397 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 CLEC14AQ86T13 490 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 ZSCAN1Q8NBB4 408 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 PLA2G15Q8NCC3 412 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 VOPP1Q96AW1 172 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 MED8Q96G25 268 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 CMKLR1Q99788 373 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 HAUS4Q9H6D7 363 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 LRRC19Q9H756 370 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 RABGEF1Q9UJ41 708 aa15.21■□□□□ 0.03
RIOK3-208ENST00000584052 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.21■□□□□ 0.031e-6■■■□□ 17.5
RIOK3-208ENST00000584052 TSPAN11A1L157 253 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 CFAP69A5D8W1 941 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 GOLGA6CA6NDK9 693 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 GOLGA6BA6NDN3 693 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 EIF3CLB5ME19 914 aaKnown RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 B8ZZF3 427 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 D6RAR5 112 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 GOLGA6DP0CG33 693 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 MMP12P39900 470 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 MAPK10P53779 464 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 NSUN2Q08J23 767 aaKnown RBP eCLIP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 TRIM14Q14142 442 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 RFTN1Q14699 578 aaPredicted RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 TSR1Q2NL82 804 aaKnown RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 TMEM164Q5U3C3 297 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 SARM1Q6SZW1 724 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 ZNF571Q7Z3V5 609 aaPredicted RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 NSMCE1Q8WV22 266 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 PDXPQ96GD0 296 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 RBM15Q96T37 977 aaKnown RBP eCLIP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 EIF3CQ99613 913 aaKnown RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 FAM117AQ9C073 453 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 WDR26Q9H7D7 661 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 MRPL40Q9NQ50 206 aaKnown RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 GOLGA6AQ9NYA3 693 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 ATXN7L1Q9ULK2 861 aaPredicted RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 LUC7L2Q9Y383 392 aaKnown RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 LOXL2Q9Y4K0 774 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 HEMK1Q9Y5R4 338 aaPredicted RBP15.2■□□□□ 0.02
RIOK3-208ENST00000584052 DGKBQ9Y6T7 804 aa15.2■□□□□ 0.02
RIOK3-208ENST00000584052 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 TCRBV5S1A1TA0A578 114 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 TMEM202A6NGA9 273 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 RHPN2P1A8MT19 583 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 ERCC2P18074 760 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 ALDH4A1P30038 563 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 IL10RBQ08334 325 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 MAMLD1Q13495 774 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 ZNF235Q14590 738 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 AGERQ15109 404 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 AMZ1Q400G9 498 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 HGSNATQ68CP4 663 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 SPECC1LQ69YQ0 1117 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 PNCKQ6P2M8 343 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 LIPIQ6XZB0 460 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 RFX8Q6ZV50 586 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 BBS5Q8N3I7 341 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 KIAA1524Q8TCG1 905 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 SNRNP27Q8WVK2 155 aaKnown RBP15.19■□□□□ 0.02
RIOK3-208ENST00000584052 OR1E3Q8WZA6 343 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 FUBP1Q96AE4 644 aaKnown RBP15.19■□□□□ 0.02
RIOK3-208ENST00000584052 TMEM159Q96B96 161 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 TMEM168Q9H0V1 697 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 PDFQ9HBH1 243 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 SEPT3Q9UH03 358 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 PCDHGA7Q9Y5G6 932 aa15.19■□□□□ 0.02
RIOK3-208ENST00000584052 BZW2Q9Y6E2 419 aaKnown RBP15.19■□□□□ 0.02
RIOK3-208ENST00000584052 KALRNO60229 2985 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 ZNF462Q96JM2 2506 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 FLNBO75369 2602 aaKnown RBP15.18■□□□□ 0.02
RIOK3-208ENST00000584052 MGAQ8IWI9 3026 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.18■□□□□ 0.02
RIOK3-208ENST00000584052 TNFRSF10CO14798 259 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 SLC28A2O43868 658 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 GZMAP12544 262 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 CCKBRP32239 447 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 RGRP47804 291 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 PDX1P52945 283 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 KIAA1024LP59773 190 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 SKOR1P84550 965 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 OGDHQ02218 1023 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
RIOK3-208ENST00000584052 TGIF1Q15583 401 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 CA9Q16790 459 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 MAP9Q49MG5 647 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 C14orf28Q4W4Y0 310 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 TDRD12Q587J7 1177 aaKnown RBP15.18■□□□□ 0.02
RIOK3-208ENST00000584052 MANEAQ5SRI9 462 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 PPP1R15BQ5SWA1 713 aa15.18■□□□□ 0.02
RIOK3-208ENST00000584052 NYAP1Q6ZVC0 841 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms