RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 C2orf42Q9NWW7 574 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SPO11Q9Y5K1 396 aa16.41■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MED19A0JLT2 244 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CCDC151A5D8V7 595 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 UPK3BL1B0FP48 263 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 UPK3BL2E5RIL1 263 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PRKCGP05129 697 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ALPIP09923 528 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PIRTP0C851 137 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SUOXP51687 545 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ZBTB16Q05516 673 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 POU6F1Q14863 301 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 FASTKD3Q14CZ7 662 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MAP9Q49MG5 647 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ANKMY2Q8IV38 441 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 ZBED8Q8IZ13 594 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MAML2Q8IZL2 1156 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SPEM1Q8N4L4 309 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 AADATQ8N5Z0 425 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 BLOC1S5Q8TDH9 187 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PYROXD1Q8WU10 500 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 HNRNPLLQ8WVV9 542 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CAVIN3Q969G5 261 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SIPA1Q96FS4 1042 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MRGPRX1Q96LB2 322 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SLC6A17Q9H1V8 727 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PABPC3Q9H361 631 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TRABDQ9H4I3 376 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 MRM3Q9HC36 420 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 PCDH12Q9NPG4 1184 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 DYRK4Q9NR20 520 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 HACD3Q9P035 362 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SCML1Q9UN30 329 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 SOX13Q9UN79 622 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 TCAF1Q9Y4C2 921 aa16.4■□□□□ 0.22
CDK5RAP3-228ENST00000583363 CEP250Q9BV73 2442 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TCRBV21S2A2A0A5A6 115 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MROH6A6NGR9 719 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PLK4O00444 970 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 AURKAO14965 403 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LDB2O43679 373 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ERLIN1O75477 346 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 DNTTP04053 509 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 GABRG2P18507 467 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 XPAP23025 273 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NFKBIAP25963 317 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 DRD3P35462 400 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CNTN1Q12860 1018 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 LAMB3Q13751 1172 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TAF1AQ15573 450 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CCDC38Q502W7 563 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FBXL19Q6PCT2 694 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ZC3H14Q6PJT7 736 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CRTC1Q6UUV9 634 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 USP45Q70EL2 814 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TMC3Q7Z5M5 1100 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CCNJLQ8IV13 435 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 HDDC3Q8N4P3 179 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FBXO36Q8NEA4 188 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PTCD2Q8WV60 388 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RAB7BQ96AH8 199 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FAM131CQ96AQ9 280 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 STAMBPL1Q96FJ0 436 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 C9orf72Q96LT7 481 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NAT9Q9BTE0 207 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CHRAC1Q9NRG0 131 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CHMP2BQ9UQN3 213 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MAD1L1Q9Y6D9 718 aa16.39■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FAM237BA0A1B0GVD1 139 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 HEATR9A2RTY3 570 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CAPN8A6NHC0 703 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NPIPB15A6NHN6 443 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 AREL1O15033 823 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CRTAMO95727 393 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CYP2A6P11509 494 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 ADRB3P13945 408 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NDUFV2P19404 249 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 P2RY2P41231 377 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MAGEA9P43362 315 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NEK3P51956 506 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PMS2P54278 862 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 FAM193AP78312 1265 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 SEMG2Q02383 582 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CCDC15Q0P6D6 951 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 MTAPQ13126 283 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PIP5KL1Q5T9C9 394 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 NLRP9Q7RTR0 991 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TMEM135Q86UB9 458 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PALM2Q8IXS6 379 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 CBARPQ8N350 705 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 TTC30BQ8N4P2 665 aa16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 PPHLN1Q8NEY8 458 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-228ENST00000583363 IER2Q9BTL4 223 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms