RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 NDFIP2Q9NV92 336 aa18.05■□□□□ 0.48
SNX11-212ENST00000583320 ANAPC5Q9UJX4 755 aa18.05■□□□□ 0.48
SNX11-212ENST00000583320 TRHDEQ9UKU6 1024 aa18.05■□□□□ 0.48
SNX11-212ENST00000583320 SHOC2Q9UQ13 582 aa18.05■□□□□ 0.48
SNX11-212ENST00000583320 TBC1D30Q9Y2I9 924 aa18.05■□□□□ 0.48
SNX11-212ENST00000583320 NYNRINQ9P2P1 1898 aaKnown RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 A0A1W2PR77 199 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 ILVBLA1L0T0 632 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 FAM47DPA6NHR8 397 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 RNF103O00237 685 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 DFFAO00273 331 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 MAFKO60675 156 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 CYBBP04839 570 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 ETFBP38117 255 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 MAGEA6P43360 314 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 VPS41P49754 854 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 ITGA8P53708 1063 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 PLTPP55058 493 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 RPS24P62847 133 aaKnown RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 IFI35P80217 286 aaPredicted RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 WASHC5Q12768 1159 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 BNIP3Q12983 259 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 ZNF177Q13360 481 aaPredicted RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 LY6DQ14210 128 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 MPPE1Q53F39 396 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 HIBCHQ6NVY1 386 aaPredicted RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 TFAP2DQ7Z6R9 452 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 PRUNE1Q86TP1 453 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 FAM181AQ8N9Y4 354 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 TMA16Q96EY4 203 aaKnown RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 FARP1Q9Y4F1 1045 aaPredicted RBP18.04■□□□□ 0.48
SNX11-212ENST00000583320 BOD1L1Q8NFC6 3051 aa18.04■□□□□ 0.48
SNX11-212ENST00000583320 C10orf142B7Z368 130 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 MATN3O15232 486 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 TP73O15350 636 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 TIMM44O43615 452 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 CDK4P11802 303 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 GLDCP23378 1020 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 FDFT1P37268 417 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 PAPOLAP51003 745 aaKnown RBP18.03■□□□□ 0.48
SNX11-212ENST00000583320 INSM1Q01101 510 aaPredicted RBP18.03■□□□□ 0.48
SNX11-212ENST00000583320 ZBTB16Q05516 673 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 POLD3Q15054 466 aaPredicted RBP18.03■□□□□ 0.48
SNX11-212ENST00000583320 ANKRD20A2Q5SQ80 823 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 RNASEH2BQ5TBB1 312 aaKnown RBP18.03■□□□□ 0.48
SNX11-212ENST00000583320 ANKRD20A1Q5TYW2 823 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 ANKRD20A3Q5VUR7 823 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 NCEH1Q6PIU2 408 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 ARHGEF18Q6ZSZ5 1173 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 B4GALNT4Q76KP1 1039 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 KANSL1Q7Z3B3 1105 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 PPIL6Q8IXY8 311 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 CFAP52Q8N1V2 620 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 FBXO25Q8TCJ0 367 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 WFDC5Q8TCV5 224 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 MAML1Q92585 1016 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 PHACTR1Q9C0D0 580 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 NEUROG2Q9H2A3 272 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 PABPC3Q9H361 631 aaKnown RBP18.03■□□□□ 0.48
SNX11-212ENST00000583320 ABCB8Q9NUT2 735 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 IPO11Q9UI26 975 aaKnown RBP18.03■□□□□ 0.48
SNX11-212ENST00000583320 PCDHB1Q9Y5F3 818 aa18.03■□□□□ 0.48
SNX11-212ENST00000583320 PTPN3P26045 913 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 SGSHP51688 502 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 OXCT1P55809 520 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 GNA12Q03113 381 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 IL10RBQ08334 325 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 CBLBQ13191 982 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 SERINC3Q13530 473 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 E2F5Q15329 346 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 PARP6Q2NL67 630 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 TTC31Q49AM3 519 aaPredicted RBP18.02■□□□□ 0.48
SNX11-212ENST00000583320 TEX44Q53QW1 395 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 ARHGAP40Q5TG30 622 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 ZNF776Q68DI1 518 aaPredicted RBP18.02■□□□□ 0.48
SNX11-212ENST00000583320 ITPRIPL1Q6GPH6 555 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 CIR1Q86X95 450 aaPredicted RBP18.02■□□□□ 0.48
SNX11-212ENST00000583320 GSPT2Q8IYD1 628 aaKnown RBP18.02■□□□□ 0.48
SNX11-212ENST00000583320 MREGQ8N565 214 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 DCBLD1Q8N8Z6 715 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 ZNF557Q8N988 423 aaPredicted RBP18.02■□□□□ 0.48
SNX11-212ENST00000583320 NETO2Q8NC67 525 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 CCDC110Q8TBZ0 833 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 ARHGEF2Q92974 986 aaKnown RBP18.02■□□□□ 0.48
SNX11-212ENST00000583320 HMCESQ96FZ2 354 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 IL12RB2Q99665 862 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 FRMD8Q9BZ67 464 aaPredicted RBP18.02■□□□□ 0.48
SNX11-212ENST00000583320 CLCA2Q9UQC9 943 aa18.02■□□□□ 0.48
SNX11-212ENST00000583320 CAPN8A6NHC0 703 aa18.01■□□□□ 0.47
SNX11-212ENST00000583320 ATP8B1O43520 1251 aa18.01■□□□□ 0.47
SNX11-212ENST00000583320 TBL1XO60907 577 aa18.01■□□□□ 0.47
SNX11-212ENST00000583320 LUC7L3O95232 432 aaKnown RBP18.01■□□□□ 0.47
SNX11-212ENST00000583320 RHOCP08134 193 aa18.01■□□□□ 0.47
SNX11-212ENST00000583320 SEMA5AQ13591 1074 aa18.01■□□□□ 0.47
SNX11-212ENST00000583320 MBLAC2Q68D91 279 aa18.01■□□□□ 0.47
SNX11-212ENST00000583320 KIAA0907Q7Z7F0 614 aaPredicted RBP18.01■□□□□ 0.47
SNX11-212ENST00000583320 ZNF567Q8N184 647 aa18.01■□□□□ 0.47
SNX11-212ENST00000583320 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.01■□□□□ 0.47
SNX11-212ENST00000583320 NAT8LQ8N9F0 302 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms