RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CPNE6O95741 557 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 ELFN1P0C7U0 828 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 CD82P27701 267 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 SOX5P35711 763 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 JAM2P57087 298 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 OR1D5P58170 312 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 GRM3Q14832 879 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 ZNF574Q6ZN55 896 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-221ENST00000583080 TSEN2Q8NCE0 465 aaKnown RBP16.21■□□□□ 0.19
SREBF1-221ENST00000583080 C3orf20Q8ND61 904 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 NSMCE3Q96MG7 304 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 TUBGCP5Q96RT8 1024 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 SLC25A18Q9H1K4 315 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 WDR26Q9H7D7 661 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 CATSPERBQ9H7T0 1116 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 NLRC4Q9NPP4 1024 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 SPATS2LQ9NUQ6 558 aaKnown RBP16.21■□□□□ 0.19
SREBF1-221ENST00000583080 GPATCH2LQ9NWQ4 482 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 GEMIN8Q9NWZ8 242 aaKnown RBP16.21■□□□□ 0.19
SREBF1-221ENST00000583080 ADAM22Q9P0K1 906 aa16.21■□□□□ 0.19
SREBF1-221ENST00000583080 ZFC3H1O60293 1989 aaKnown RBP16.2■□□□□ 0.18
SREBF1-221ENST00000583080 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 PRSS38A1L453 326 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 A8MX80 341 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 TNFRSF10CO14798 259 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 SFTPCP11686 197 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 KELP23276 732 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 SERPINA4P29622 427 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 TRIM23P36406 574 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 NSFP46459 744 aaKnown RBP16.2■□□□□ 0.18
SREBF1-221ENST00000583080 POLR2FP61218 127 aaKnown RBP16.2■□□□□ 0.18
SREBF1-221ENST00000583080 CLEC16AQ2KHT3 1053 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 TRIM72Q6ZMU5 477 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 DPPA4Q7L190 304 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 ZNF438Q7Z4V0 828 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 SRLQ86TD4 932 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 NRROSQ86YC3 692 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 PTCD2Q8WV60 388 aaKnown RBP16.2■□□□□ 0.18
SREBF1-221ENST00000583080 ECHDC3Q96DC8 303 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 CCDC74BQ96LY2 380 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 SLC12A9Q9BXP2 914 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 ATP13A3Q9H7F0 1226 aa16.2■□□□□ 0.18
SREBF1-221ENST00000583080 CARS2Q9HA77 564 aaKnown RBP16.2■□□□□ 0.18
SREBF1-221ENST00000583080 FAM207AQ9NSI2 230 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-221ENST00000583080 FLNCQ14315 2725 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 IGHV5-10-1A0A0J9YXX1 117 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 CFAP69A5D8W1 941 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 STMND1H3BQB6 276 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 FGF10O15520 208 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-221ENST00000583080 TEX33O43247 280 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 HOXC4P09017 264 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-221ENST00000583080 ALDH4A1P30038 563 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 ZNF143P52747 638 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-221ENST00000583080 TPI1P60174 286 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 UBE2HP62256 183 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 RPL7AP62424 266 aaKnown RBP16.19■□□□□ 0.18
SREBF1-221ENST00000583080 TCP11X2Q5H9J9 407 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 AFMIDQ63HM1 303 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 ARHGAP36Q6ZRI8 547 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 MON1BQ7L1V2 547 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 PIM3Q86V86 326 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 C17orf82Q86X59 251 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-221ENST00000583080 PTRH1Q86Y79 214 aaKnown RBP16.19■□□□□ 0.18
SREBF1-221ENST00000583080 PHF13Q86YI8 300 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-221ENST00000583080 KIAA1524Q8TCG1 905 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 ZDHHC1Q8WTX9 485 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 PATE1Q8WXA2 126 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 NKD1Q969G9 470 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 SLC39A8Q9C0K1 460 aa16.19■□□□□ 0.18
SREBF1-221ENST00000583080 SIGLEC16A6NMB1 481 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 FUCA1P04066 466 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 FGF1P05230 155 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 CALB1P05937 261 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 FGF3P11487 239 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-221ENST00000583080 MYCLP1P12525 358 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-221ENST00000583080 CCNB1P14635 433 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 LIFP15018 202 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 AK4P27144 223 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-221ENST00000583080 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-221ENST00000583080 CSF2RBP32927 897 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 CSNK1DP48730 415 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 PAPOLAP51003 745 aaKnown RBP16.18■□□□□ 0.18
SREBF1-221ENST00000583080 OGDHQ02218 1023 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 NR1D2Q14995 579 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 ACOX1Q15067 660 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 CA9Q16790 459 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 TMEM164Q5U3C3 297 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 PNCKQ6P2M8 343 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 DNAJC24Q6P3W2 148 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 GPBAR1Q8TDU6 330 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 B3GNT4Q9C0J1 378 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 EPN3Q9H201 632 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 VPS16Q9H269 839 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 TAAR2Q9P1P5 351 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 B4GALT6Q9UBX8 382 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 ST14Q9Y5Y6 855 aa16.18■□□□□ 0.18
SREBF1-221ENST00000583080 RHPN2P1A8MT19 583 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 TRAFD1O14545 582 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-221ENST00000583080 HGSO14964 777 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms