RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	TRMT11	Q7Z4G4	463 aa	Known RBP	7.52	□□□□□ -1.21
NF1-222	ENST00000582892	FAM35A	Q86V20	835 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	METTL23	Q86XA0	190 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	PASD1	Q8IV76	773 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	WDTC1	Q8N5D0	677 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	ZNF248	Q8NDW4	579 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	ZNF417	Q8TAU3	575 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	DYDC1	Q8WWB3	177 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.52	□□□□□ -1.21
NF1-222	ENST00000582892	RBM15	Q96T37	977 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
NF1-222	ENST00000582892	PRMT1	Q99873	361 aa	Known RBP	7.52	□□□□□ -1.21
NF1-222	ENST00000582892	HEMGN	Q9BXL5	484 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	MTMR12	Q9C0I1	747 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	CAAP1	Q9H8G2	361 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	SLC40A1	Q9NP59	571 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	KLC4	Q9NSK0	619 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	DNAJC17	Q9NVM6	304 aa	Known RBP	7.52	□□□□□ -1.21
NF1-222	ENST00000582892	DDX43	Q9NXZ2	648 aa	Known RBP	7.52	□□□□□ -1.21
NF1-222	ENST00000582892	ZFAT	Q9P243	1243 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	DSE	Q9UL01	958 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	NAALADL1	Q9UQQ1	740 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	ARL2BP	Q9Y2Y0	163 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	STARD13	Q9Y3M8	1113 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	OTOG	Q6ZRI0	2925 aa		7.52	□□□□□ -1.21
NF1-222	ENST00000582892	PMS2P1	A4D2B8	440 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	FAM47DP	A6NHR8	397 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	C3orf70	A6NLC5	250 aa	Predicted RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SMIM23	A6NLE4	172 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	KPNA7	A9QM74	516 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	NEDD8-MDP1	E9PL57	170 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	CHUK	O15111	745 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	HOXC11	O43248	304 aa	Predicted RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SPAG6	O75602	509 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	FAM155B	O75949	473 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	CALCA	P01258	141 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	GHRH	P01286	108 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	VIM	P08670	466 aa	Known RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SETSIP	P0DME0	302 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	MBL2	P11226	248 aa	Predicted RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	KRT3	P12035	628 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	BRAF	P15056	766 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	CD58	P19256	250 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	GLDC	P23378	1020 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	ACSL1	P33121	698 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	PHB	P35232	272 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SLCO1A2	P46721	670 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	ARSE	P51690	589 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	COPA	P53621	1224 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	RPL7A	P62424	266 aa	Known RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SLC25A11	Q02978	314 aa	Known RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	GAD2	Q05329	585 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SMARCB1	Q12824	385 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	IFRD2	Q12894	506 aa	Predicted RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	NFE2	Q16621	373 aa	Predicted RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	GALNTL6	Q49A17	601 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	GRAMD4	Q6IC98	578 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	C4orf22	Q6V702	233 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	LINC00114	Q6XXX2	140 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	TRABD2A	Q86V40	505 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	PPIL6	Q8IXY8	311 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	FUK	Q8N0W3	1084 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	EID2	Q8N6I1	236 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SLC4A11	Q8NBS3	891 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	CADM4	Q8NFZ8	388 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	EDEM1	Q92611	657 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	IGSF8	Q969P0	613 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	MCEE	Q96PE7	176 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	ORAI3	Q9BRQ5	295 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	RPF1	Q9H9Y2	349 aa	Known RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	ITM2C	Q9NQX7	267 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	SPHK2	Q9NRA0	654 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	ASNSD1	Q9NWL6	643 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	DPP3	Q9NY33	737 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	TRPM5	Q9NZQ8	1165 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	DNPEP	Q9ULA0	475 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	ZNF148	Q9UQR1	794 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	PCDHGA1	Q9Y5H4	931 aa		7.51	□□□□□ -1.21
NF1-222	ENST00000582892	HEMK1	Q9Y5R4	338 aa	Predicted RBP	7.51	□□□□□ -1.21
NF1-222	ENST00000582892	EXOC1L	A0A1B0GW35	172 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892		A0A1W2PNU3	283 aa	Predicted RBP	7.5	□□□□□ -1.21
NF1-222	ENST00000582892	LRRD1	A4D1F6	860 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	CFAP69	A5D8W1	941 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892		F8VP50	259 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	APOC4-APOC2	K7ER74	178 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	SLC9A3R1	O14745	358 aa	Predicted RBP	7.5	□□□□□ -1.21
NF1-222	ENST00000582892	COCH	O43405	550 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	MGRN1	O60291	552 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	ICMT	O60725	284 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	MMP20	O60882	483 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	LRCH4	O75427	683 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	ATP5H	O75947	161 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	ENDOD1	O94919	500 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	LDOC1	O95751	146 aa	Predicted RBP	7.5	□□□□□ -1.21
NF1-222	ENST00000582892	APOC2	P02655	101 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	WNT1	P04628	370 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	VDR	P11473	427 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	PECAM1	P16284	738 aa	Predicted RBP	7.5	□□□□□ -1.21
NF1-222	ENST00000582892	BDNF	P23560	247 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	KDELR1	P24390	212 aa		7.5	□□□□□ -1.21
NF1-222	ENST00000582892	PSMA2	P25787	234 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms