RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 FAM124AQ86V42 546 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 CCDC25Q86WR0 208 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 GSPT2Q8IYD1 628 aaKnown RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 PDIK1LQ8N165 341 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 NDUFAF2Q8N183 169 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 DTWD2Q8NBA8 298 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 BRSK1Q8TDC3 778 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 BLOC1S5Q8TDH9 187 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 RAB7BQ96AH8 199 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 EID2BQ96D98 161 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 FMO2Q99518 471 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 WDR83Q9BRX9 315 aaKnown RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 FOXP3Q9BZS1 431 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 C11orf16Q9NQ32 467 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 SYBUQ9NX95 663 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 BFARQ9NZS9 450 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 USP36Q9P275 1121 aaKnown RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 RAB21Q9UL25 225 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 ZNF711Q9Y462 761 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 KCTD3Q9Y597 815 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 FADS3Q9Y5Q0 445 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 TEX264Q9Y6I9 313 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 CUL9Q8IWT3 2517 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 C1orf232A0A0U1RR37 186 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 FAM86C2PA6NEL3 165 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 MROH6A6NGR9 719 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 EIF3HO15372 352 aaKnown RBP eCLIP9.55□□□□□ -0.88
RFFL-210ENST00000582308 SLC7A4O43246 635 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 PLRG1O43660 514 aaKnown RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 LDB2O43679 373 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 AP1G1O43747 822 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 CLDN7O95471 211 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ACADMP11310 421 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TDGF1P13385 188 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ADRA1DP25100 572 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 AVPR2P30518 371 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 HOXA6P31267 233 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ELK3P41970 407 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ADPRHP54922 357 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 PTSQ03393 145 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 DMWDQ09019 674 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 CCDC15Q0P6D6 951 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ELP6Q0PNE2 266 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 SFSWAPQ12872 951 aaKnown RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 PDIA2Q13087 525 aaKnown RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 PTPRCAPQ14761 206 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TAF1AQ15573 450 aaPredicted RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 CNGA3Q16281 694 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TMEM52BQ4KMG9 183 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 DNAJC21Q5F1R6 531 aaKnown RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 LRRC66Q68CR7 880 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ERAP2Q6P179 960 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TSSK4Q6SA08 328 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 LIPIQ6XZB0 460 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 RFLNAQ6ZTI6 216 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 CENPUQ71F23 418 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TMC3Q7Z5M5 1100 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 KBTBD6Q86V97 674 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ANKMY2Q8IV38 441 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 C1orf210Q8IVY1 113 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 MAML2Q8IZL2 1156 aaPredicted RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 CBARPQ8N350 705 aaPredicted RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 FRMD1Q8N878 549 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 OR14C36Q8NHC7 312 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ZNF778Q96MU6 729 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 RANBP9Q96S59 729 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 SRPK1Q96SB4 655 aaKnown RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 TRIM56Q9BRZ2 755 aaKnown RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 KIFC1Q9BW19 673 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TPSD1Q9BZJ3 242 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 GPR63Q9BZJ6 419 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 PHACTR1Q9C0D0 580 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 IL22Q9GZX6 179 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TRABDQ9H4I3 376 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 SAYSD1Q9NPB0 183 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 PRMT8Q9NR22 394 aaPredicted RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 CHRAC1Q9NRG0 131 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.55□□□□□ -0.88
RFFL-210ENST00000582308 HACD3Q9P035 362 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 MTRF1LQ9UGC7 380 aaKnown RBP9.55□□□□□ -0.88
RFFL-210ENST00000582308 FZD4Q9ULV1 537 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 NCKAP1Q9Y2A7 1128 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 TCAF1Q9Y4C2 921 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 ARL5AQ9Y689 179 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 PIKFYVEQ9Y2I7 2098 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 FANCMQ8IYD8 2048 aa9.55□□□□□ -0.88
RFFL-210ENST00000582308 KNL1Q8NG31 2342 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 CCDC78A2IDD5 438 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 HEATR9A2RTY3 570 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 C10orf142B7Z368 130 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 NEMP1O14524 444 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 LAMTOR5O43504 91 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 TSPAN6O43657 245 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 BUD23O43709 281 aaKnown RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 MMP20O60882 483 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 SLC4A1P02730 911 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 C1SP09871 688 aa9.54□□□□□ -0.88
RFFL-210ENST00000582308 CYP2A6P11509 494 aaPredicted RBP9.54□□□□□ -0.88
RFFL-210ENST00000582308 GM2AP17900 193 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms