RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GOT2P00505 430 aaKnown RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 GLRBP48167 497 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 SLC7A9P82251 487 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 ARF5P84085 180 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 ZNF460Q14592 562 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 RBM20Q5T481 1227 aaKnown RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 ELMSAN1Q6PJG2 1045 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 GDPD5Q8WTR4 605 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 DRC3Q9H069 523 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 CDH19Q9H159 772 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 NLE1Q9NVX2 485 aaPredicted RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 ACTL7AQ9Y615 435 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 NUMBLQ9Y6R0 609 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 TRAV19A0A0A6YYK7 116 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 ATP6V1G2O95670 118 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 S1PR4O95977 384 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 CKMP06732 381 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 RBP1P09455 135 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 LTA4HP09960 611 aaKnown RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 SERPINB5P36952 375 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 RGRP47804 291 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 NUMBP49757 651 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 SLC20A2Q08357 652 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 RCN2Q14257 317 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 HSF5Q4G112 596 aaPredicted RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 AFTPHQ6ULP2 937 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 GLT6D1Q7Z4J2 308 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 CPXM2Q8N436 756 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 TMEM151AQ8N4L1 468 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 DCAF4L2Q8NA75 395 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 OR4L1Q8NH43 312 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 SLC22A17Q8WUG5 538 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 PDCD6IPQ8WUM4 868 aaKnown RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 USP13Q92995 863 aaPredicted RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 EXOC2Q96KP1 924 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 GPR78Q96P69 363 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 SLC22A12Q96S37 553 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 BTBD10Q9BSF8 475 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 GPAMQ9HCL2 828 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 INTS10Q9NVR2 710 aaKnown RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 PNPOQ9NVS9 261 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.71■■□□□ 1.235e-7■■■■□ 24.2
CCDC47-204ENST00000582252 RAP2CQ9Y3L5 183 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 KCTD3Q9Y597 815 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 RAI2Q9Y5P3 530 aa22.71■■□□□ 1.23
CCDC47-204ENST00000582252 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.7■■□□□ 1.22
CCDC47-204ENST00000582252 TARM1B6A8C7 271 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 SLCO1B7G3V0H7 640 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 GFRA2O00451 464 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 HOXA9P31269 272 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 GRIA4P48058 902 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 ADAMTS19Q8TE59 1207 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 NDNQ99608 321 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 FEM1AQ9BSK4 669 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 TBC1D10AQ9BXI6 508 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 TLE6Q9H808 572 aa22.7■■□□□ 1.22
CCDC47-204ENST00000582252 RPL26L1Q9UNX3 145 aaKnown RBP22.7■■□□□ 1.22
CCDC47-204ENST00000582252 CCDC162PA2VCL2 907 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 AURKAO14965 403 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 PFDN6O15212 129 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 GREM1O60565 184 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 ZMPSTE24O75844 475 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 CYP4F8P98187 520 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 PRKAA1Q13131 559 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 ZNF789Q5FWF6 425 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 CHRDL2Q6WN34 429 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 NAPRTQ6XQN6 538 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 HTR3DQ70Z44 454 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 TTC7BQ86TV6 843 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 TDRD5Q8NAT2 981 aaKnown RBP22.69■■□□□ 1.22
CCDC47-204ENST00000582252 HEXDCQ8WVB3 486 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 OLFM1Q99784 485 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 EBF4Q9BQW3 602 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 C2orf49Q9BVC5 232 aaPredicted RBP22.69■■□□□ 1.22
CCDC47-204ENST00000582252 PRO3102Q9H379 93 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 POPDC3Q9HBV1 291 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 HACD3Q9P035 362 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 BAIAP2L1Q9UHR4 511 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 VPS9D1Q9Y2B5 631 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 ANKRD36A6QL64 1941 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 TRIOBPQ9H2D6 2365 aa22.69■■□□□ 1.22
CCDC47-204ENST00000582252 CAPN14A8MX76 684 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 NPHS1O60500 1241 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 SBK3P0C264 359 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 EPCAMP16422 314 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 ATP5F1P24539 256 aaPredicted RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 PMLP29590 882 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 ZNF140P52738 457 aaPredicted RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 ALDH18A1P54886 795 aaKnown RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 DNAJB13P59910 316 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 RHOAP61586 193 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 CSHL1Q14406 222 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 ACAP2Q15057 778 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 MPPE1Q53F39 396 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 MPP7Q5T2T1 576 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 RETSATQ6NUM9 610 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 NCEH1Q6PIU2 408 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 METTL3Q86U44 580 aaKnown RBP22.68■■□□□ 1.22
CCDC47-204ENST00000582252 LONP2Q86WA8 852 aa22.68■■□□□ 1.22
CCDC47-204ENST00000582252 TMC8Q8IU68 726 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms