RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 MC2RQ01718 297 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 LRRC63Q05C16 580 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 SQSTM1Q13501 440 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 UGP2Q16851 508 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 TMEM71Q6P5X7 295 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 CEACAM20Q6UY09 585 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 DPYSL5Q9BPU6 564 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 LGR4Q9BXB1 951 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 GSDMCQ9BYG8 508 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 TRIT1Q9H3H1 467 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 CARS2Q9HA77 564 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 TAAR2Q9P1P5 351 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 PPARGC1AQ9UBK2 798 aaKnown RBP12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 DNAI1Q9UI46 699 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 MFHAS1Q9Y4C4 1052 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 TMEM184BQ9Y519 407 aaPredicted RBP12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 PCDHB3Q9Y5E6 796 aa12.61□□□□□ -0.39
CSNK1D-218ENST00000581655 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 A8MU76 341 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 BECN2A8MW95 431 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 K7ELQ4 463 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 BUB1O43683 1085 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 RECQL5O94762 991 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 MAN1A1P33908 653 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 USP8P40818 1118 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 STAT1P42224 750 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 PPM1FP49593 454 aaPredicted RBP12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 RHOAP61586 193 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 ERV3-1Q14264 604 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 SLC25A52Q3SY17 297 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 SNAP47Q5SQN1 464 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 C1QL3Q5VWW1 255 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 ERAP2Q6P179 960 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 FAM131BQ86XD5 332 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 NAGSQ8N159 534 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 EXOC2Q96KP1 924 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 NCAPGQ9BPX3 1015 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 MAGEH1Q9H213 219 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 POLHQ9Y253 713 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 MAP4K5Q9Y4K4 846 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 RPS6KL1Q9Y6S9 549 aa12.6□□□□□ -0.39
CSNK1D-218ENST00000581655 RAMP2O60895 175 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 DLGAP3O95886 979 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 HOXC4P09017 264 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 TRIM23P36406 574 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 MMP12P39900 470 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 NOP2P46087 812 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 SNX16P57768 344 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 MRPL49Q13405 166 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 PNOCQ13519 176 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 NADK2Q4G0N4 442 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 ZNF658Q5TYW1 1059 aaPredicted RBP12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 ERICH6BQ5W0A0 696 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 RWDD4Q6NW29 188 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 GJB7Q6PEY0 223 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 TMEM135Q86UB9 458 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 NLRP14Q86W24 1093 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 ZNF354CQ86Y25 554 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 PELI3Q8N2H9 469 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 PRR7Q8TB68 274 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 RNF31Q96EP0 1072 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 WDR26Q9H7D7 661 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 TMEM248Q9NWD8 314 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 RMND1Q9NWS8 449 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 ATP8A1Q9Y2Q0 1164 aa12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 OAS3Q9Y6K5 1087 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-218ENST00000581655 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 WIPF3A6NGB9 483 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 TEX33O43247 280 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 KDELR3O43731 214 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 DNAJB5O75953 348 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ZNF202O95125 648 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 RHOQP17081 205 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 FLT3P36888 993 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 DLSTP36957 453 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 PMS2P54278 862 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 GPLD1P80108 840 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 PKP1Q13835 747 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 FAM102AQ5T9C2 384 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 MANEALQ5VSG8 457 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ARHGAP22Q7Z5H3 698 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ZSWIM9Q86XI8 627 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ZDHHC17Q8IUH5 632 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ADGRG4Q8IZF6 3080 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 ESX1Q8N693 406 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 AHCYL2Q96HN2 611 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
CSNK1D-218ENST00000581655 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms