RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 NR1D2Q14995 579 aa19.19■□□□□ 0.66
NDEL1-209ENST00000580738 NKAIN2Q5VXU1 208 aa19.19■□□□□ 0.66
NDEL1-209ENST00000580738 HIST2H2BCQ6DN03 193 aa19.19■□□□□ 0.66
NDEL1-209ENST00000580738 DNAAF5Q86Y56 855 aa19.19■□□□□ 0.66
NDEL1-209ENST00000580738 RTL3Q8N8U3 475 aaKnown RBP19.19■□□□□ 0.66
NDEL1-209ENST00000580738 JOSD2Q8TAC2 188 aa19.19■□□□□ 0.66
NDEL1-209ENST00000580738 SUDS3Q9H7L9 328 aaPredicted RBP19.19■□□□□ 0.66
NDEL1-209ENST00000580738 ANKRD36A6QL64 1941 aa19.19■□□□□ 0.66
NDEL1-209ENST00000580738 SPENQ96T58 3664 aaKnown RBP19.19■□□□□ 0.66
NDEL1-209ENST00000580738 PRSS38A1L453 326 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 ZNF891A8MT65 544 aaPredicted RBP19.18■□□□□ 0.66
NDEL1-209ENST00000580738 DUX1O43812 170 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 ECEL1O95672 775 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 FUCA1P04066 466 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 MMEP08473 750 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 CCNB1P14635 433 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 GM2AP17900 193 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 KELP23276 732 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 SDC4P31431 198 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 HDAC4P56524 1084 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 NOMO3P69849 1222 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 RALGDSQ12967 914 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 CFAP58Q5T655 872 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 BRAT1Q6PJG6 821 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 LIPIQ6XZB0 460 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 ZDHHC1Q8WTX9 485 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 PATE1Q8WXA2 126 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 ZNF641Q96N77 438 aaPredicted RBP19.18■□□□□ 0.66
NDEL1-209ENST00000580738 CATSPER2Q96P56 530 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 OCIAD1Q9NX40 245 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 RWDD2AQ9UIY3 292 aa19.18■□□□□ 0.66
NDEL1-209ENST00000580738 ARHGEF17Q96PE2 2063 aaPredicted RBP19.17■□□□□ 0.66
NDEL1-209ENST00000580738 TEX33O43247 280 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 RAD1O60671 282 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 HOXC4P09017 264 aaPredicted RBP19.17■□□□□ 0.66
NDEL1-209ENST00000580738 PRKAR1AP10644 381 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 EPHB2P29323 1055 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 STAT1P42224 750 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 MTIF2P46199 727 aaKnown RBP19.17■□□□□ 0.66
NDEL1-209ENST00000580738 CLPPQ16740 277 aaPredicted RBP19.17■□□□□ 0.66
NDEL1-209ENST00000580738 MSANTD4Q8NCY6 345 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 AGBL5Q8NDL9 886 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 CENPIQ92674 756 aaPredicted RBP19.17■□□□□ 0.66
NDEL1-209ENST00000580738 ABHD17AQ96GS6 310 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 DDA1Q9BW61 102 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 WDR26Q9H7D7 661 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 CARS2Q9HA77 564 aaKnown RBP19.17■□□□□ 0.66
NDEL1-209ENST00000580738 SLC39A1Q9NY26 324 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 TMEM9Q9P0T7 183 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 TAAR2Q9P1P5 351 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 FHOD1Q9Y613 1164 aa19.17■□□□□ 0.66
NDEL1-209ENST00000580738 C2CD4BA6NLJ0 364 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 A8MX80 341 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 AK4P27144 223 aaPredicted RBP19.16■□□□□ 0.66
NDEL1-209ENST00000580738 CSF2RBP32927 897 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 CSTF2P33240 577 aaKnown RBP eCLIP19.16■□□□□ 0.66
NDEL1-209ENST00000580738 PTPN9P43378 593 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 RGRP47804 291 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 YBEYP58557 167 aaPredicted RBP19.16■□□□□ 0.66
NDEL1-209ENST00000580738 TRA2AQ13595 282 aaKnown RBP eCLIP19.16■□□□□ 0.66
NDEL1-209ENST00000580738 GRM3Q14832 879 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 PNCKQ6P2M8 343 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 STRADAQ7RTN6 431 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 OR4D9Q8NGE8 314 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 FAM172AQ8WUF8 416 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 SLC45A3Q96JT2 553 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 ASPSCR1Q9BZE9 553 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 UBA2Q9UBT2 640 aaPredicted RBP19.16■□□□□ 0.66
NDEL1-209ENST00000580738 PILRAQ9UKJ1 303 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 ST14Q9Y5Y6 855 aa19.16■□□□□ 0.66
NDEL1-209ENST00000580738 SPTBN1Q01082 2364 aaKnown RBP19.15■□□□□ 0.66
NDEL1-209ENST00000580738 CFAP69A5D8W1 941 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 J3KR12 359 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 PPM1DO15297 605 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 ELFN1P0C7U0 828 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 PARP15Q460N3 678 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 ANKS6Q68DC2 871 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 FAM129CQ86XR2 697 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 UNC5BQ8IZJ1 945 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 CCDC112Q8NEF3 446 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 PTCD2Q8WV60 388 aaKnown RBP19.15■□□□□ 0.66
NDEL1-209ENST00000580738 NTAN1Q96AB6 310 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 TUBGCP5Q96RT8 1024 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 PDFQ9HBH1 243 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 LRRC4CQ9HCJ2 640 aa19.15■□□□□ 0.66
NDEL1-209ENST00000580738 IGHV1OR21-1A0A087WYE8 117 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 LOC101059948A0A1B0GTJ6 334 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 EFCAB7A8K855 629 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 MTSS1O43312 755 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 CEACAM5P06731 702 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 THRAP10827 490 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 MMP8P22894 467 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 OAS2P29728 719 aaKnown RBP19.14■□□□□ 0.65
NDEL1-209ENST00000580738 GPR3P46089 330 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 CDC20Q12834 499 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 ILF3Q12906 894 aaKnown RBP eCLIP19.14■□□□□ 0.65
NDEL1-209ENST00000580738 BIRC2Q13490 618 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 TSR1Q2NL82 804 aaKnown RBP19.14■□□□□ 0.65
NDEL1-209ENST00000580738 DCAF12Q5T6F0 453 aa19.14■□□□□ 0.65
NDEL1-209ENST00000580738 AFMIDQ63HM1 303 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms