RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TMEM202A6NGA9 273 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 B4DGG1 531 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 TEX33O43247 280 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 NOBOXO60393 691 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 CPNE6O95741 557 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 HGFP14210 728 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 TNFAIP3P21580 790 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 SCNN1BP51168 640 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 MAPK10P53779 464 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 AP1S1P61966 158 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 UBXN1Q04323 297 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 ILF3Q12906 894 aaKnown RBP eCLIP17.96■□□□□ 0.47
MKS1-209ENST00000580127 NFATC3Q12968 1075 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 ERMARDQ5T6L9 678 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 AFMIDQ63HM1 303 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 SPECC1LQ69YQ0 1117 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 PNCKQ6P2M8 343 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 SPRED1Q7Z699 444 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 TSEN2Q8NCE0 465 aaKnown RBP17.96■□□□□ 0.47
MKS1-209ENST00000580127 PDXPQ96GD0 296 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 CELF6Q96J87 481 aaKnown RBP17.96■□□□□ 0.47
MKS1-209ENST00000580127 GSDMCQ9BYG8 508 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 SLC39A8Q9C0K1 460 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 DHX35Q9H5Z1 703 aaKnown RBP17.96■□□□□ 0.47
MKS1-209ENST00000580127 PHPT1Q9NRX4 125 aaPredicted RBP17.96■□□□□ 0.47
MKS1-209ENST00000580127 AP4E1Q9UPM8 1137 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 SIK3Q9Y2K2 1263 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 RNF215Q9Y6U7 377 aa17.96■□□□□ 0.47
MKS1-209ENST00000580127 TENM4Q6N022 2769 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 DFFAO00273 331 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 CASC3O15234 703 aaKnown RBP17.95■□□□□ 0.46
MKS1-209ENST00000580127 KRT10P13645 584 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 FERP16591 822 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 CSRP3P50461 194 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 IL10RBQ08334 325 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 TGIF1Q15583 401 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 MAP9Q49MG5 647 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 DPPA4Q7L190 304 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 MCOLN2Q8IZK6 566 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 BBS5Q8N3I7 341 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 PLA2G15Q8NCC3 412 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 CCDC112Q8NEF3 446 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 USP7Q93009 1102 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 ECHDC3Q96DC8 303 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 TMEM168Q9H0V1 697 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 FANCLQ9NW38 375 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 SEPT3Q9UH03 358 aa17.95■□□□□ 0.46
MKS1-209ENST00000580127 MYO18BQ8IUG5 2567 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 ARHGEF17Q96PE2 2063 aaPredicted RBP17.94■□□□□ 0.46
MKS1-209ENST00000580127 PRAMEF33A0A0G2JMD5 474 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 TCRBV5S1A1TA0A578 114 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 EPHB6O15197 1021 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 PRPSAP2O60256 369 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 PRAMEF10O60809 474 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 PSMA2P25787 234 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 ALDH4A1P30038 563 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 COPB1P53618 953 aaKnown RBP17.94■□□□□ 0.46
MKS1-209ENST00000580127 HLTFQ14527 1009 aaKnown RBP eCLIP17.94■□□□□ 0.46
MKS1-209ENST00000580127 PPP1R15BQ5SWA1 713 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 ATG14Q6ZNE5 492 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 PSTKQ8IV42 348 aaKnown RBP17.94■□□□□ 0.46
MKS1-209ENST00000580127 EXD3Q8N9H8 876 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 ZNF599Q96NL3 588 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 SEMA3CQ99985 751 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 FGF22Q9HCT0 170 aa17.94■□□□□ 0.46
MKS1-209ENST00000580127 MRPL40Q9NQ50 206 aaKnown RBP17.94■□□□□ 0.46
MKS1-209ENST00000580127 PRSS38A1L453 326 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 HGSO14964 777 aaPredicted RBP17.93■□□□□ 0.46
MKS1-209ENST00000580127 PRKCGP05129 697 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 CYP2A6P11509 494 aaPredicted RBP17.93■□□□□ 0.46
MKS1-209ENST00000580127 MYCLP1P12525 358 aaPredicted RBP17.93■□□□□ 0.46
MKS1-209ENST00000580127 CCNB1P14635 433 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 HSPA9P38646 679 aaKnown RBP17.93■□□□□ 0.46
MKS1-209ENST00000580127 GPR3P46089 330 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 HCAR3P49019 387 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 ATP1A2P50993 1020 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 AMZ1Q400G9 498 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 PPP6R3Q5H9R7 873 aaPredicted RBP17.93■□□□□ 0.46
MKS1-209ENST00000580127 SASS6Q6UVJ0 657 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 RFX8Q6ZV50 586 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 NDUFAF2Q8N183 169 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 GPBAR1Q8TDU6 330 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 NSMCE1Q8WV22 266 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 EXTL1Q92935 676 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 PSKH2Q96QS6 385 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 DPYSL5Q9BPU6 564 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 CARS2Q9HA77 564 aaKnown RBP17.93■□□□□ 0.46
MKS1-209ENST00000580127 TRNAU1APQ9NX07 287 aaKnown RBP17.93■□□□□ 0.46
MKS1-209ENST00000580127 IL17BQ9UHF5 180 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 ANKRD36A6QL64 1941 aa17.93■□□□□ 0.46
MKS1-209ENST00000580127 LRP4O75096 1905 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 LGALS16A8MUM7 142 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 A8MX80 341 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 STMND1H3BQB6 276 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 ERCC2P18074 760 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 ITIH1P19827 911 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 B4GALNT1Q00973 533 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 RALGDSQ12967 914 aa17.92■□□□□ 0.46
MKS1-209ENST00000580127 MAMLD1Q13495 774 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms