RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 TAF1BQ53T94 588 aaPredicted RBP13.76□□□□□ -0.21
GGA3-208ENST00000579743 CCDC122Q5T0U0 273 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 USP45Q70EL2 814 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 ARFGAP1Q8N6T3 406 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 KYQ8NBH2 561 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 CCDC74AQ96AQ1 378 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 LIN37Q96GY3 246 aaPredicted RBP13.76□□□□□ -0.21
GGA3-208ENST00000579743 NUDCD1Q96RS6 583 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 DPEP2Q9H4A9 486 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 ASCL3Q9NQ33 180 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 AKAP7Q9P0M2 348 aaPredicted RBP13.76□□□□□ -0.21
GGA3-208ENST00000579743 PHTF1Q9UMS5 762 aa13.76□□□□□ -0.21
GGA3-208ENST00000579743 ASXL3Q9C0F0 2248 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 A0A1W2PQJ5 194 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 ERVH48-1M5A8F1 160 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 TRAFD1O14545 582 aaPredicted RBP13.75□□□□□ -0.21
GGA3-208ENST00000579743 TNFSF15O95150 251 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 PRKCGP05129 697 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 SERPING1P05155 500 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 RPLP0P05388 317 aaKnown RBP13.75□□□□□ -0.21
GGA3-208ENST00000579743 ITGA2BP08514 1039 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 PNLIPP16233 465 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 GLB1P16278 677 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 CA4P22748 312 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 AMPD1P23109 780 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 VIPR1P32241 457 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 TRIM23P36406 574 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 INHBCP55103 352 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 UBASH3AP57075 661 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 SLC10A7Q0GE19 358 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 ILF3Q12906 894 aaKnown RBP eCLIP13.75□□□□□ -0.21
GGA3-208ENST00000579743 NR1I3Q14994 352 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 SMTNL2Q2TAL5 461 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 PNCKQ6P2M8 343 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 POLNQ7Z5Q5 900 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 FBXO39Q8N4B4 442 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 NPWQ8N729 165 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 TMEM159Q96B96 161 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 NUS1Q96E22 293 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
GGA3-208ENST00000579743 GSDMCQ9BYG8 508 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 EPB41L5Q9HCM4 733 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 CYP4F12Q9HCS2 524 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 RCOR3Q9P2K3 495 aaPredicted RBP13.75□□□□□ -0.21
GGA3-208ENST00000579743 LCMT1Q9UIC8 334 aa13.75□□□□□ -0.21
GGA3-208ENST00000579743 PNMA8BQ9ULN7 279 aaPredicted RBP13.75□□□□□ -0.21
GGA3-208ENST00000579743 GOLGA6CA6NDK9 693 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 GOLGA6BA6NDN3 693 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 A8MX80 341 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 PSMD11O00231 422 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 NTN3O00634 580 aaPredicted RBP13.74□□□□□ -0.21
GGA3-208ENST00000579743 PLD2O14939 933 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 HTRA2O43464 458 aaPredicted RBP13.74□□□□□ -0.21
GGA3-208ENST00000579743 JMJD7P0C870 316 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 GOLGA6DP0CG33 693 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 MYCLP1P12525 358 aaPredicted RBP13.74□□□□□ -0.21
GGA3-208ENST00000579743 CES1P23141 567 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 MMP13P45452 471 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 ZBED6P86452 979 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 ITKQ08881 620 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 VAC14Q08AM6 782 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 RALGDSQ12967 914 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 TCEA2Q15560 299 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 ARMC12Q5T9G4 340 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 DENND2CQ68D51 928 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 TIGD7Q6NT04 549 aaPredicted RBP13.74□□□□□ -0.21
GGA3-208ENST00000579743 ARHGAP36Q6ZRI8 547 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 RAB11FIP2Q7L804 512 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 ZSWIM9Q86XI8 627 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 CCNJLQ8IV13 435 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 MAP7D3Q8IWC1 876 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 NIPA2Q8N8Q9 360 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 PLA2G15Q8NCC3 412 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 FUBP1Q96AE4 644 aaKnown RBP13.74□□□□□ -0.21
GGA3-208ENST00000579743 WBP1Q96G27 269 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 PDXPQ96GD0 296 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 BBC3Q96PG8 261 aaPredicted RBP13.74□□□□□ -0.21
GGA3-208ENST00000579743 CSPG4P5Q96PW8 444 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 LRRN3Q9H3W5 708 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 WDR70Q9NW82 654 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 GOLGA6AQ9NYA3 693 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 B4GALT6Q9UBX8 382 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 ANAPC7Q9UJX3 599 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 APPL1Q9UKG1 709 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 DNPEPQ9ULA0 475 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 LUC7L2Q9Y383 392 aaKnown RBP13.74□□□□□ -0.21
GGA3-208ENST00000579743 PCDHGC4Q9Y5F7 938 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 SPEGQ15772 3267 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 FREM2Q5SZK8 3169 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 SHROOM3Q8TF72 1996 aa13.74□□□□□ -0.21
GGA3-208ENST00000579743 PRSS38A1L453 326 aa13.73□□□□□ -0.21
GGA3-208ENST00000579743 TMEM202A6NGA9 273 aa13.73□□□□□ -0.21
GGA3-208ENST00000579743 B4DGG1 531 aa13.73□□□□□ -0.21
GGA3-208ENST00000579743 D6RAR5 112 aa13.73□□□□□ -0.21
GGA3-208ENST00000579743 NUDT21O43809 227 aaKnown RBP13.73□□□□□ -0.21
GGA3-208ENST00000579743 MAFKO60675 156 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms