RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 MAMDC2Q7Z304 686 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 TAF8Q7Z7C8 310 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 TMEM135Q86UB9 458 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 NLGN4XQ8N0W4 816 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 NLGN4YQ8NFZ3 816 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 OR56A4Q8NGH8 313 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 GPT2Q8TD30 523 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 CXorf40AQ8TE69 158 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 NSMCE3Q96MG7 304 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 TBCBQ99426 244 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 CRACR2AQ9BSW2 395 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 KLC2Q9H0B6 622 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 GPN2Q9H9Y4 310 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 APMAPQ9HDC9 416 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 MLXIPLQ9NP71 852 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 PRDM8Q9NQV8 689 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 SLC39A1Q9NY26 324 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 PPARGC1AQ9UBK2 798 aaKnown RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 ERRFI1Q9UJM3 462 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 FAM72CH0Y354 149 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 BUB1BO60566 1050 aaPredicted RBP11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 ECEL1O95672 775 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 DDAH2O95865 285 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 CCNB1P14635 433 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 GRNP28799 593 aaKnown RBP11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 STAT5AP42229 794 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 GPR3P46089 330 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 LIG3P49916 1009 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 FAM72AQ5TYM5 149 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 FAM72DQ6L9T8 149 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 LEKR1Q6ZMV7 388 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 C11orf57Q6ZUT1 292 aaPredicted RBP11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 ASB18Q6ZVZ8 466 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 FAM72BQ86X60 149 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 TEX19Q8NA77 164 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 AGBL5Q8NDL9 886 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 CPT1CQ8TCG5 803 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 HAPLN3Q96S86 360 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 ASPSCR1Q9BZE9 553 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 ZYG11BQ9C0D3 744 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 UBE2TQ9NPD8 197 aaPredicted RBP11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 TLK1Q9UKI8 766 aa11.21□□□□□ -0.61
SUPT4H1-203ENST00000579289 EFCAB7A8K855 629 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 TCP11X1B4DZS4 312 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 SRGAP2O75044 1071 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 VPS4BO75351 444 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 CEACAM5P06731 702 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 SLC9A1P19634 815 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 ERCC5P28715 1186 aaPredicted RBP11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 ALDH4A1P30038 563 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 GNA15P30679 374 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 MMP12P39900 470 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 MTIF2P46199 727 aaKnown RBP11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 SNRPD1P62314 119 aaKnown RBP11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 NRG1Q02297 640 aaPredicted RBP11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 APBA1Q02410 837 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 UGP2Q16851 508 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 EIF2S3LQ2VIR3 472 aaKnown RBP11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 NADK2Q4G0N4 442 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 HSP90AA4PQ58FG1 418 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 DCAF12Q5T6F0 453 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 TMEM71Q6P5X7 295 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 GJB7Q6PEY0 223 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 DRC7Q8IY82 874 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 Q8NA96 180 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 HCAR2Q8TDS4 363 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 CTRCQ99895 268 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 C1QTNF7Q9BXJ2 289 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 TRIM55Q9BYV6 548 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 DPEP2Q9H4A9 486 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 CYP4F12Q9HCS2 524 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 PCDH12Q9NPG4 1184 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 FBXO8Q9NRD0 319 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 LHX3Q9UBR4 397 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 VPS4AQ9UN37 437 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 KCTD3Q9Y597 815 aa11.2□□□□□ -0.62
SUPT4H1-203ENST00000579289 THAP12O43422 761 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 KDELR3O43731 214 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 TMCC1O94876 653 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 PIGNO95427 931 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 PCCBP05166 539 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 KRT5P13647 590 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 ZNF28P17035 718 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 AK4P27144 223 aaPredicted RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 HTR1BP28222 390 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 FLT3P36888 993 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 STAT1P42224 750 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 GABRB2P47870 512 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 MRPL49Q13405 166 aaKnown RBP11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 LAMB3Q13751 1172 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 MAP7Q14244 749 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 CYTH1Q15438 398 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 SLC25A52Q3SY17 297 aa11.19□□□□□ -0.62
SUPT4H1-203ENST00000579289 GBP6Q6ZN66 633 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms