RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MARCKSL1P49006 195 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 PEX5P50542 639 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 DUSP3P51452 185 aaPredicted RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 RPL26P61254 145 aaKnown RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 PPIDQ08752 370 aaKnown RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 ZNF211Q13398 564 aaPredicted RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 C1orf61Q13536 156 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 IRF4Q15306 451 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 SHBQ15464 509 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 TCEA2Q15560 299 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 PRRT3Q5FWE3 981 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 DARS2Q6PI48 645 aaKnown RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 KDM7AQ6ZMT4 941 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 DBX2Q6ZNG2 339 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 PID1Q7Z2X4 250 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 NT5DC3Q86UY8 548 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 SLC25A45Q8N413 288 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 CCDC112Q8NEF3 446 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 CCHCR1Q8TD31 782 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 KRT35Q92764 455 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 GLMNQ92990 594 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 FATE1Q969F0 183 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 TSACCQ96A04 125 aaPredicted RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 NUS1Q96E22 293 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 RBM15Q96T37 977 aaKnown RBP eCLIP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 APOOQ9BUR5 198 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 MLPHQ9BV36 600 aaPredicted RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 SCNM1Q9BWG6 230 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 OSBPL8Q9BZF1 889 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 TSGA10Q9BZW7 698 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 WDR26Q9H7D7 661 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 SUDS3Q9H7L9 328 aaPredicted RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 UCKL1Q9NWZ5 548 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 KCTD5Q9NXV2 234 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 KLHL8Q9P2G9 620 aaPredicted RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 SPASTQ9UBP0 616 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 KLQ9UEF7 1012 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 APOBEC3BQ9UH17 382 aaKnown RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 SALL4Q9UJQ4 1053 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 DNPEPQ9ULA0 475 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 GUCA1BQ9UMX6 200 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 RPL26L1Q9UNX3 145 aaKnown RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 REXO2Q9Y3B8 237 aaKnown RBP6.57□□□□□ -1.36
TRAF4-213ENST00000578917 EML5Q05BV3 1969 aa6.57□□□□□ -1.36
TRAF4-213ENST00000578917 PI4KAP42356 2102 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 hCG_1818297A0A087WSY0 165 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 C1orf232A0A0U1RR37 186 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CPED1A4D0V7 1026 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 NPIPB15A6NHN6 443 aaPredicted RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 MIF4GDA9UHW6 222 aaKnown RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 HACD1B0YJ81 288 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 F5H423 210 aaPredicted RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 SCAMP1O15126 338 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PJA2O43164 708 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 ARHGAP6O43182 974 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PMPCBO75439 489 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PIAS2O75928 621 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 HEXIM1O94992 359 aaKnown RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 RASGRP1O95267 797 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 FTCDO95954 541 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 SLC4A1P02730 911 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 HLA-DQB2P05538 268 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CCDC175P0C221 793 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CDK4P11802 303 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 JUPP14923 745 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 NME1P15531 152 aaKnown RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PECAM1P16284 738 aaPredicted RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CKMT2P17540 419 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 IGFALSP35858 605 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 GPR1P46091 355 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 RPIAP49247 311 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 EIF3EP60228 445 aaKnown RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PFN3P60673 137 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 SRP54P61011 504 aaKnown RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 IFI35P80217 286 aaPredicted RBP6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CDK18Q07002 472 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 NIPAL4Q0D2K0 466 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 ZBTB17Q13105 803 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 DNAJC3Q13217 504 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 BIRC2Q13490 618 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 MTM1Q13496 603 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PRPSAP1Q14558 356 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 NFATC4Q14934 902 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PTPRRQ15256 657 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 ELOCQ15369 112 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 DEFB133Q30KQ1 61 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 TEX44Q53QW1 395 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 LRRC66Q68CR7 880 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 RAET1GQ6H3X3 334 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PNCKQ6P2M8 343 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 CRTC1Q6UUV9 634 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 MACC1Q6ZN28 852 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 Q6ZVL8 140 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 BBS12Q6ZW61 710 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 HSD11B1LQ7Z5J1 315 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 GLRX5Q86SX6 157 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 TSPAN33Q86UF1 283 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 SLCO6A1Q86UG4 719 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 PHACTR4Q8IZ21 702 aa6.56□□□□□ -1.36
TRAF4-213ENST00000578917 SLC22A18ASQ8N1D0 253 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms