RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 ZNF512Q96ME7 567 aaPredicted RBP8.29□□□□□ -1.08
SKA2-203ENST00000578105 FAM161BQ96MY7 647 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 TRIB3Q96RU7 358 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 EBF4Q9BQW3 602 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 HIPK3Q9H422 1215 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 TFB2MQ9H5Q4 396 aaKnown RBP8.29□□□□□ -1.08
SKA2-203ENST00000578105 CAB39LQ9H9S4 337 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 NLE1Q9NVX2 485 aaPredicted RBP8.29□□□□□ -1.08
SKA2-203ENST00000578105 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 IL1RAPL1Q9NZN1 696 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 ARMCX1Q9P291 453 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 NUDT5Q9UKK9 219 aa8.29□□□□□ -1.08
SKA2-203ENST00000578105 SYCE1LA8MT33 242 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 A8MUI8 341 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 CD3EAPO15446 510 aaKnown RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 PHGDHO43175 533 aaKnown RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 S1PR4O95977 384 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 PYGLP06737 847 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 SBK3P0C264 359 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 COX4I1P13073 169 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 IMPDH1P20839 514 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 ELF1P32519 619 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 NAGLUP54802 743 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 KDSRQ06136 332 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 KLF10Q13118 480 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 E2F5Q15329 346 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 ARL13AQ5H913 290 aaPredicted RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 MPP7Q5T2T1 576 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 IL31Q6EBC2 164 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 UGT3A1Q6NUS8 523 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 TLDC1Q6P9B6 456 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 PGM2L1Q6PCE3 622 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 MAVSQ7Z434 540 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 TMEM126BQ8IUX1 230 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 TCEAL8Q8IYN2 117 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 CMTR2Q8IYT2 770 aaKnown RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 PGBD5Q8N414 524 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 NKAPQ8N5F7 415 aaKnown RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 SLC25A41Q8N5S1 370 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 TTC9BQ8N6N2 239 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 ZNF557Q8N988 423 aaPredicted RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 OR6P1Q8NGX9 317 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 OR4L1Q8NH43 312 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 HEXDCQ8WVB3 486 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 HDAC10Q969S8 669 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 TMEM169Q96HH4 297 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 ZNF558Q96NG5 402 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 CYP2S1Q96SQ9 504 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 CCT7Q99832 543 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 KLF16Q9BXK1 252 aaPredicted RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 CCDC68Q9H2F9 335 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 IGSF5Q9NSI5 407 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 CATSPERZQ9NTU4 200 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 TMEM45AQ9NWC5 275 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 UTP6Q9NYH9 597 aaKnown RBP8.28□□□□□ -1.08
SKA2-203ENST00000578105 SLC2A6Q9UGQ3 507 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 SLC27A5Q9Y2P5 690 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 L3MBTL1Q9Y468 752 aa8.28□□□□□ -1.08
SKA2-203ENST00000578105 COL4A6Q14031 1691 aa8.27□□□□□ -1.08
SKA2-203ENST00000578105 MICAL3Q7RTP6 2002 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 SOBPA7XYQ1 873 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 H3BNC9 293 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 COCHO43405 550 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 GRID2O43424 1007 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 VPS4BO75351 444 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 STC2O76061 302 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 TBX18O95935 607 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 C1RP00736 705 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 URODP06132 367 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 FGF4P08620 206 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 PCSK2P16519 638 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 HMGA1P17096 107 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 NCF2P19878 526 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 ATP6V1C1P21283 382 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 PMLP29590 882 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 OR1D2P34982 312 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CHRNA4P43681 627 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 PTDSS1P48651 473 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 CSNK1DP48730 415 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 TTPAP49638 278 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CLCN2P51788 898 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 STC1P52823 247 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 EPHB3P54753 998 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 MAXP61244 160 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 AP1S1P61966 158 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 STX5Q13190 355 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 CYLC2Q14093 348 aaPredicted RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 CSHL1Q14406 222 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 KPNB1Q14974 876 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 CRY1Q16526 586 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 GSTA3Q16772 222 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 SPATS1Q496A3 300 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 KHDC1Q4VXA5 237 aaKnown RBP8.27□□□□□ -1.09
SKA2-203ENST00000578105 ACSBG2Q5FVE4 666 aa8.27□□□□□ -1.09
SKA2-203ENST00000578105 FAM182AQ5T1J6 154 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms