RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TP53INP2Q8IXH6 220 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 TXLNBQ8N3L3 684 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 ATPAF2Q8N5M1 289 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 TSEN2Q8NCE0 465 aaKnown RBP16.13■□□□□ 0.17
VAPA-204ENST00000577901 HCAR2Q8TDS4 363 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 ASB12Q8WXK4 309 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 RAPGEF5Q92565 580 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 FAF2Q96CS3 445 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 WBP1Q96G27 269 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 EXOC2Q96KP1 924 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 KLHL32Q96NJ5 620 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 SEPT3Q9UH03 358 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 SALL4Q9UJQ4 1053 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 ALG6Q9Y672 507 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 A0A1W2PNU3 283 aaPredicted RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 EME2A4GXA9 379 aaPredicted RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 ZNF487B1APH4 448 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TPP1O14773 563 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 BUB1BO60566 1050 aaPredicted RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 MAFKO60675 156 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TNNT1P13805 278 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 RBMS1P29558 406 aaKnown RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 GSDMDP57764 484 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 EIF2B5Q13144 721 aaKnown RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 NCBP2-AS2Q69YL0 99 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 CRTC1Q6UUV9 634 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 RBM44Q6ZP01 1051 aaKnown RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 SRLQ86TD4 932 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TTC7BQ86TV6 843 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 DENND6BQ8NEG7 585 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TPCN2Q8NHX9 752 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 BTN2A2Q8WVV5 523 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 GRAMD1AQ96CP6 724 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 ATXN7L3BQ96GX2 97 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 ZNF641Q96N77 438 aaPredicted RBP16.12■□□□□ 0.17
VAPA-204ENST00000577901 RNF157Q96PX1 679 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 PSKH2Q96QS6 385 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TUBGCP5Q96RT8 1024 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 IL12RB2Q99665 862 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 SPASTQ9UBP0 616 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 DKK3Q9UBP4 350 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 GGT7Q9UJ14 662 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TFR2Q9UP52 801 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 ITM2BQ9Y287 266 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 ENTPD2Q9Y5L3 495 aa16.12■□□□□ 0.17
VAPA-204ENST00000577901 TDRD6O60522 2096 aaKnown RBP16.11■□□□□ 0.17
VAPA-204ENST00000577901 INSIG1O15503 277 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 KRT1P04264 644 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 MX2P20592 715 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 XPAP23025 273 aaPredicted RBP16.11■□□□□ 0.17
VAPA-204ENST00000577901 HSPA9P38646 679 aaKnown RBP16.11■□□□□ 0.17
VAPA-204ENST00000577901 VAC14Q08AM6 782 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 SLC10A7Q0GE19 358 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 GALNT2Q10471 571 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 ZNF235Q14590 738 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 MARC1Q5VT66 337 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 TIGD7Q6NT04 549 aaPredicted RBP16.11■□□□□ 0.17
VAPA-204ENST00000577901 KIAA1328Q86T90 577 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 RBFAQ8N0V3 343 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 GLMNQ92990 594 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 SLC46A1Q96NT5 459 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 SUV39H2Q9H5I1 410 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 ATP13A3Q9H7F0 1226 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.11■□□□□ 0.17
VAPA-204ENST00000577901 HYOU1Q9Y4L1 999 aa16.11■□□□□ 0.17
VAPA-204ENST00000577901 ZNF462Q96JM2 2506 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 BTNL10A8MVZ5 291 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 MUSKO15146 869 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 MFSD11O43934 449 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 ZFXP17010 805 aaPredicted RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 SERPINA4P29622 427 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 GARSP41250 739 aaKnown RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 RPIAP49247 311 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 SCNN1BP51168 640 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 SUOXP51687 545 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 VAV2P52735 878 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 THOP1P52888 689 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 C1orf61Q13536 156 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 PTK2BQ14289 1009 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 IFI16Q16666 785 aaKnown RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 PRRT3Q5FWE3 981 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 PERM1Q5SV97 790 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 C11orf63Q6NUN7 778 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 DAAM2Q86T65 1068 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 PQLC3Q8N755 202 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 PAF1Q8N7H5 531 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 VOPP1Q96AW1 172 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 RNF25Q96BH1 459 aaPredicted RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 CENPTQ96BT3 561 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 PRR11Q96HE9 360 aaPredicted RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 ZNF830Q96NB3 372 aaPredicted RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 BOCQ9BWV1 1114 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 TCEAL2Q9H3H9 227 aaPredicted RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 HAUS2Q9NVX0 235 aa16.1■□□□□ 0.17
VAPA-204ENST00000577901 APOBEC3BQ9UH17 382 aaKnown RBP16.1■□□□□ 0.17
VAPA-204ENST00000577901 REXO2Q9Y3B8 237 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms