RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 PCDHGA4Q9Y5G9 962 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
CDH8-202ENST00000577228 SCN8AQ9UQD0 1980 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 MAST4O15021 2626 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 UNC13CQ8NB66 2214 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 EEF2KO00418 725 aaKnown RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 NUDT21O43809 227 aaKnown RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 PALMO75781 387 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 HOXC4P09017 264 aaPredicted RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 CSRP3P50461 194 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 PAPOLAP51003 745 aaKnown RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 BCL2L1Q07817 233 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 CDKAL1Q5VV42 579 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 DCUN1D2Q6PH85 259 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 LIPIQ6XZB0 460 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 ZSCAN1Q8NBB4 408 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 NEK11Q8NG66 645 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 KIAA1524Q8TCG1 905 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 ECHDC3Q96DC8 303 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 CINPQ9BW66 212 aaPredicted RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 SLC39A8Q9C0K1 460 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 SP110Q9HB58 689 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 AKAP7Q9P0M2 348 aaPredicted RBP11.85□□□□□ -0.51
CDH8-202ENST00000577228 AP4E1Q9UPM8 1137 aa11.85□□□□□ -0.51
CDH8-202ENST00000577228 A0A1W2PQC6 194 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 PRSS38A1L453 326 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 C9orf172C9J069 976 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
CDH8-202ENST00000577228 TEX33O43247 280 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 FAM87AP0C7U9 286 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 SFTPCP11686 197 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 CD82P27701 267 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 TRIM23P36406 574 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
CDH8-202ENST00000577228 POLR2LP62875 67 aaKnown RBP11.84□□□□□ -0.51
CDH8-202ENST00000577228 C16orf72Q14CZ0 275 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 ACOX1Q15067 660 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 PPP1R15BQ5SWA1 713 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 TMEM164Q5U3C3 297 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 AFMIDQ63HM1 303 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 ATG14Q6ZNE5 492 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 TMPRSS9Q7Z410 1059 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 CCL4L1Q8NHW4 92 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 AGPAT1Q99943 283 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 LGR4Q9BXB1 951 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 SEMA6CQ9H3T2 930 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 DHX35Q9H5Z1 703 aaKnown RBP11.84□□□□□ -0.51
CDH8-202ENST00000577228 SUDS3Q9H7L9 328 aaPredicted RBP11.84□□□□□ -0.51
CDH8-202ENST00000577228 STARD5Q9NSY2 213 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 HECTD1Q9ULT8 2610 aa11.84□□□□□ -0.51
CDH8-202ENST00000577228 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 RHPN2P1A8MT19 583 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 A8MX80 341 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 EIF3CLB5ME19 914 aaKnown RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 DFFAO00273 331 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 DAPK3O43293 454 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 CPNE6O95741 557 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 MYCLP1P12525 358 aaPredicted RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 CCNB1P14635 433 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 GM2AP17900 193 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 PSMA2P25787 234 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 SCNN1BP51168 640 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 MAZP56270 477 aaKnown RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 AP1S1P61966 158 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 NFKB2Q00653 900 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 B4GALNT1Q00973 533 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 OGDHQ02218 1023 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 ILF3Q12906 894 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDH8-202ENST00000577228 RFTN1Q14699 578 aaPredicted RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 TBR1Q16650 682 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 CA9Q16790 459 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 AMZ1Q400G9 498 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 ACAD10Q6JQN1 1059 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 PNCKQ6P2M8 343 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 PIM3Q86V86 326 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 DTX1Q86Y01 620 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 MCOLN2Q8IZK6 566 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 PELI3Q8N2H9 469 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 ZDHHC1Q8WTX9 485 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 NUS1Q96E22 293 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 COQ10AQ96MF6 247 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 EIF3CQ99613 913 aaKnown RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 GSDMCQ9BYG8 508 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 B3GNT4Q9C0J1 378 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 CARS2Q9HA77 564 aaKnown RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 RDH14Q9HBH5 336 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 PHPT1Q9NRX4 125 aaPredicted RBP11.83□□□□□ -0.52
CDH8-202ENST00000577228 B4GALT6Q9UBX8 382 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 IL17BQ9UHF5 180 aa11.83□□□□□ -0.52
CDH8-202ENST00000577228 TLN1Q9Y490 2541 aaKnown RBP11.82□□□□□ -0.52
CDH8-202ENST00000577228 LGALS16A8MUM7 142 aa11.82□□□□□ -0.52
CDH8-202ENST00000577228 TRAFD1O14545 582 aaPredicted RBP11.82□□□□□ -0.52
CDH8-202ENST00000577228 TERTO14746 1132 aaKnown RBP11.82□□□□□ -0.52
CDH8-202ENST00000577228 ZW10O43264 779 aa11.82□□□□□ -0.52
CDH8-202ENST00000577228 B4GAT1O43505 415 aa11.82□□□□□ -0.52
CDH8-202ENST00000577228 ERCC2P18074 760 aa11.82□□□□□ -0.52
CDH8-202ENST00000577228 ITGB6P18564 788 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms