RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 IGHV4-34P06331 123 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 PIRTP0C851 137 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CTAGE8P0CG41 777 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CYP2A6P11509 494 aaPredicted RBP8.59□□□□□ -1.03
NUP88-211ENST00000575976 HLA-DPA1P20036 260 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 LHCGRP22888 699 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 MAT2AP31153 395 aaKnown RBP8.59□□□□□ -1.03
NUP88-211ENST00000575976 VIPR1P32241 457 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 MMP12P39900 470 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 ADCY8P40145 1251 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 GRIA1P42261 906 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 TNNT3P45378 269 aaPredicted RBP8.59□□□□□ -1.03
NUP88-211ENST00000575976 LIG3P49916 1009 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 SIM2Q14190 667 aaPredicted RBP8.59□□□□□ -1.03
NUP88-211ENST00000575976 CNGA3Q16281 694 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CDKN3Q16667 212 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 ZNF284Q2VY69 593 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 ANKRD22Q5VYY1 191 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 SEL1L3Q68CR1 1132 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 PMS2CLQ68D20 193 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 DENND5AQ6IQ26 1287 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 NEK5Q6P3R8 708 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CRTC1Q6UUV9 634 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 LIPIQ6XZB0 460 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 PRR23BQ6ZRT6 265 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 ARMCX6Q7L4S7 300 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 LPCAT2Q7L5N7 544 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 MAATS1Q7Z4T9 603 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 TSPAN33Q86UF1 283 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CTAGE6Q86UF2 777 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 C11orf74Q86VG3 221 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 HORMAD1Q86X24 394 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CTAGE4Q8IX94 777 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CEP112Q8N8E3 955 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 MNS1Q8NEH6 495 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CADM4Q8NFZ8 388 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 OR52K1Q8NGK4 314 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CCHCR1Q8TD31 782 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CXorf40AQ8TE69 158 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 CPT1BQ92523 772 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 BIRC7Q96CA5 298 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 LRRC45Q96CN5 670 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 ZC3H10Q96K80 434 aaKnown RBP8.59□□□□□ -1.03
NUP88-211ENST00000575976 HSPA12BQ96MM6 686 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 HINFPQ9BQA5 517 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 EBF2Q9HAK2 575 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 MAGEE1Q9HCI5 957 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 PIH1D1Q9NWS0 290 aaKnown RBP8.59□□□□□ -1.03
NUP88-211ENST00000575976 ASIC3Q9UHC3 531 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 COQ6Q9Y2Z9 468 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 SPO11Q9Y5K1 396 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 ZNF292O60281 2723 aa8.59□□□□□ -1.03
NUP88-211ENST00000575976 DMXL1Q9Y485 3027 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 ERI2A8K979 691 aaKnown RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 EFCAB8A8MWE9 144 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 DNALI1O14645 258 aaPredicted RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 AURKAO14965 403 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 SLC31A1O15431 190 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 TM7SF2O76062 418 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 RHOBTB1O94844 696 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 TMEM63AO94886 807 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 HEXIM1O94992 359 aaKnown RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 CLDN7O95471 211 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 PAK4O96013 591 aaPredicted RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 FGF1P05230 155 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 C1SP09871 688 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 C6P13671 934 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 TPH1P17752 444 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 GM2AP17900 193 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 TPSB2P20231 275 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 NFKBIAP25963 317 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 IVDP26440 423 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 MAOBP27338 520 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 PTGER3P43115 390 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 MAGEA6P43360 314 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 DHPSP49366 369 aaPredicted RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 CCR5P51681 352 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 RPS21P63220 83 aaKnown RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 MSLNQ13421 630 aaPredicted RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 ARHGEF7Q14155 803 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 FGL2Q14314 439 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 KCNJ11Q14654 390 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 TPSAB1Q15661 275 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 LPAL2Q16609 132 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 TMEM259Q4ZIN3 620 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 LRRC66Q68CR7 880 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 DENND2CQ68D51 928 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 NAPEPLDQ6IQ20 393 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 KIAA1161Q6NSJ0 714 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 ZC3H14Q6PJT7 736 aaKnown RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 PPP1R21Q6ZMI0 780 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 LINC00523Q86TU6 105 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 TRIM69Q86WT6 500 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 KIAA2013Q8IYS2 634 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 MMGT1Q8N4V1 131 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 NAT8LQ8N9F0 302 aa8.58□□□□□ -1.04
NUP88-211ENST00000575976 NOA1Q8NC60 698 aaKnown RBP8.58□□□□□ -1.04
NUP88-211ENST00000575976 BLOC1S5Q8TDH9 187 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms