RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 DHTKD1Q96HY7 919 aaPredicted RBP16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 TMEM51Q9NW97 253 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 TAAR2Q9P1P5 351 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 KCTD3Q9Y597 815 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 MRPS18BQ9Y676 258 aaKnown RBP16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 KCNMB2Q9Y691 235 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 ABCA12Q86UK0 2595 aa16.33■□□□□ 0.2
CTDNEP1-211ENST00000575783 PRSS38A1L453 326 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 A8MU76 341 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 GOLGA8SH3BPF8 625 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 PPM1DO15297 605 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 RECQL5O94762 991 aaPredicted RBP16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 CD44P16070 742 aaKnown RBP16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 CSF2RBP32927 897 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 ILF3Q12906 894 aaKnown RBP eCLIP16.32■□□□□ 0.23e-14■■■■□ 20.1
CTDNEP1-211ENST00000575783 TSR1Q2NL82 804 aaKnown RBP16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 SNAP47Q5SQN1 464 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 TCTN3Q6NUS6 607 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 SLC30A9Q6PML9 568 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 PHLDB2Q86SQ0 1253 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 CCDC13Q8IYE1 715 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 TEFMQ96QE5 360 aaKnown RBP16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 GSDMCQ9BYG8 508 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 MAGEB5Q9BZ81 275 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 SPRY4Q9C004 299 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 PDCL3Q9H2J4 239 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 SUV39H2Q9H5I1 410 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 WDR26Q9H7D7 661 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 TMEM248Q9NWD8 314 aa16.32■□□□□ 0.2
CTDNEP1-211ENST00000575783 RP1L1Q8IWN7 2480 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 CSMD1Q96PZ7 3565 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 IGHV1OR21-1A0A087WYE8 117 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 ZSCAN5CA6NGD5 496 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 FAM72CH0Y354 149 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 SLC9A1P19634 815 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 AK4P27144 223 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 MMP12P39900 470 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 STAT1P42224 750 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 ATP11AP98196 1134 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 ABHD18Q0P651 414 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 C2CD6Q53TS8 623 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 FAM72AQ5TYM5 149 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 FAM72DQ6L9T8 149 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 TRNP1Q6NT89 227 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 TMEM71Q6P5X7 295 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 SLC47A2Q86VL8 602 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 FAM72BQ86X60 149 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 FAM114A1Q8IWE2 563 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 BMPERQ8N8U9 685 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 CPT1CQ8TCG5 803 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 HCAR2Q8TDS4 363 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 C18orf8Q96DM3 657 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 KLC2Q9H0B6 622 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 ATP8A1Q9Y2Q0 1164 aa16.31■□□□□ 0.2
CTDNEP1-211ENST00000575783 STK17BO94768 372 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 HOXC4P09017 264 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 ADRA1BP35368 520 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 TRIM23P36406 574 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 NOP2P46087 812 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 GNPDA1P46926 289 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 MC2RQ01718 297 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 RAB6CQ53S08 254 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 INO80DQ53TQ3 878 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 TTI2Q6NXR4 508 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 CEACAM20Q6UY09 585 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 XYLT1Q86Y38 959 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 CASKIN2Q8WXE0 1202 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 SHC3Q92529 594 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 AHCYL2Q96HN2 611 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 DPYSL5Q9BPU6 564 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 RAB6CQ9H0N0 254 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 CASS4Q9NQ75 786 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 PCDHB3Q9Y5E6 796 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 FBN2P35556 2912 aa16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 PRRC2CQ9Y520 2896 aaKnown RBP16.3■□□□□ 0.2
CTDNEP1-211ENST00000575783 CACNA1DQ01668 2161 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 A8MX80 341 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 PDE2AO00408 941 aaPredicted RBP16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 BUB1BO60566 1050 aaPredicted RBP16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 LRIG2O94898 1065 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 GNA14O95837 355 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 FUCA1P04066 466 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 BMP6P22004 513 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 MAN1A1P33908 653 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 DCTP40126 519 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 SQSTM1Q13501 440 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 ERV3-1Q14264 604 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 CYTH1Q15438 398 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 MANEALQ5VSG8 457 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 PNCKQ6P2M8 343 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 BNIPLQ7Z465 357 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 ZSWIM9Q86XI8 627 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 ZNF761Q86XN6 746 aaPredicted RBP16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 CAMK1DQ8IU85 385 aa16.29■□□□□ 0.2
CTDNEP1-211ENST00000575783 NAGSQ8N159 534 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms