RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 MEI4A8MW99 385 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 SLCO1B7G3V0H7 640 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 SNAP91O60641 907 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 TMCC1O94876 653 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 ANP32DO95626 131 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 F11P03951 625 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 PDHA1P08559 390 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 RBP1P09455 135 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 HDCP19113 662 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 CES1P23141 567 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 COPAP53621 1224 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 PREPLQ4J6C6 727 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 WLSQ5T9L3 541 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 METTL21CQ5VZV1 264 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 BHMTQ93088 406 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 CCDC126Q96EE4 140 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 NUF2Q9BZD4 464 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 CYP4F12Q9HCS2 524 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 NKX1-2Q9UD57 310 aaPredicted RBP14.08□□□□□ -0.16
VPS33B-208ENST00000574755 VPS28Q9UK41 221 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 RIMKLBQ9ULI2 386 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 RAI2Q9Y5P3 530 aa14.08□□□□□ -0.16
VPS33B-208ENST00000574755 H0Y3Z8 333 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 NPHS1O60500 1241 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 MAGEC1O60732 1142 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 OGNP20774 298 aaKnown RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 MZF1P28698 734 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 EPHA3P29320 983 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ZNF140P52738 457 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 STC1P52823 247 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 DNAJB13P59910 316 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 PFKPQ01813 784 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 NSUN2Q08J23 767 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 KPNB1Q14974 876 aaKnown RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 PABPC1LQ4VXU2 614 aaKnown RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 TMEM207Q6UWW9 146 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ZNF783Q6ZMS7 281 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 PHTF2Q8N3S3 785 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 MDGA1Q8NFP4 955 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 OR4K2Q8NGD2 314 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 CMTM5Q96DZ9 223 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 THTPAQ9BU02 230 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 EBF2Q9HAK2 575 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 NLE1Q9NVX2 485 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 VTI1BQ9UEU0 232 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 CORO1CQ9ULV4 474 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 PLA2G4CQ9UP65 541 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 CPQQ9Y646 472 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 KIAA1671Q9BY89 1806 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 C2orf81A6NN90 581 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ZBTB14O43829 449 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 IPO13O94829 963 aaKnown RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 LATS1O95835 1130 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 CD160O95971 181 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 PRLP01236 227 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ACRP10323 421 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 SLC26A3P40879 764 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 PLK1P53350 603 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ZXDBP98169 803 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ILF2Q12905 390 aaKnown RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 CDH18Q13634 790 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 TAF1AQ15573 450 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 KHDC1Q4VXA5 237 aaKnown RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ZNF549Q6P9A3 640 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 SCUBE1Q8IWY4 988 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 HJURPQ8NCD3 748 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 SH3RF2Q8TEC5 729 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 TMA16Q96EY4 203 aaKnown RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ADGRE3Q9BY15 652 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 ALG9Q9H6U8 611 aa14.07□□□□□ -0.16
VPS33B-208ENST00000574755 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 MTF2Q9Y483 593 aaPredicted RBP14.07□□□□□ -0.16
VPS33B-208ENST00000574755 UBA6A0AVT1 1052 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-208ENST00000574755 A8MT66 165 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 GRID2O43424 1007 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 TM7SF2O76062 418 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 LUC7L3O95232 432 aaKnown RBP14.06□□□□□ -0.16
VPS33B-208ENST00000574755 TIMP1P01033 207 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 LMNAP02545 664 aaKnown RBP14.06□□□□□ -0.16
VPS33B-208ENST00000574755 PRSS56P0CW18 603 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 HOXB8P17481 243 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-208ENST00000574755 KCNA5P22460 613 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 FDXRP22570 491 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 GABRR2P28476 465 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 PPM1AP35813 382 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 PDCD2Q16342 344 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-208ENST00000574755 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 SH2D4BQ5SQS7 431 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 ACAD11Q709F0 780 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 ZNF784Q8NCA9 323 aaPredicted RBP14.06□□□□□ -0.16
VPS33B-208ENST00000574755 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 WDR60Q8WVS4 1066 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 PHF21BQ96EK2 531 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 CNDP1Q96KN2 507 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 SMIM14Q96QK8 99 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 FEM1AQ9BSK4 669 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 OSBPL1AQ9BXW6 950 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 DCLRE1BQ9H816 532 aa14.06□□□□□ -0.16
VPS33B-208ENST00000574755 IL21Q9HBE4 155 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms