RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 NMRAL1Q9HBL8 299 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 MARCH4Q9P2E8 410 aaPredicted RBP28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 CORO1CQ9ULV4 474 aaPredicted RBP28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 HS3ST2Q9Y278 367 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 FGF3P11487 239 aaPredicted RBP28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 HLA-FP30511 346 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 TAS2R39P59534 338 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 ZNF789Q5FWF6 425 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 ATXN7L2Q5T6C5 722 aaPredicted RBP28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 RNF187Q5TA31 235 aaPredicted RBP28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 RAPH1Q70E73 1250 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 GLT6D1Q7Z4J2 308 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 CCDC91Q7Z6B0 441 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 CEP97Q8IW35 865 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 EFHBQ8N7U6 833 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 OR6Y1Q8NGX8 325 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 OR4L1Q8NH43 312 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 RDH11Q8TC12 318 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 ELMO2Q96JJ3 720 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 ZSWIM3Q96MP5 696 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 SPHK2Q9NRA0 654 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 MARK1Q9P0L2 795 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 MID2Q9UJV3 735 aa28.5■■■□□ 2.15
CTDNEP1-210ENST00000574322 A0A087X1B8 175 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 CD3EAPO15446 510 aaKnown RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 ZNF821O75541 412 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 CPA3P15088 417 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 HOXB8P17481 243 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 LPOP22079 712 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 GMPRP36959 345 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 GRIA4P48058 902 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 IRX4P78413 519 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 CCDC15Q0P6D6 951 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 STX3Q13277 289 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 GBP7Q8N8V2 638 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 RMDN2Q96LZ7 410 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 THAP1Q9NVV9 213 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 CCL22O00626 93 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 PHGDHO43175 533 aaKnown RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 HTRA2O43464 458 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 PGLSO95336 258 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 CEBPBP17676 345 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 GRK2P25098 689 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 DMC1Q14565 340 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 PTPRCAPQ14761 206 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 TYSND1Q2T9J0 566 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 ARID3BQ8IVW6 561 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 CENPLQ8N0S6 344 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 TMEM151AQ8N4L1 468 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 VN1R2Q8NFZ6 395 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 TSPAN17Q96FV3 270 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 C19orf43Q9BQ61 176 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 SUDS3Q9H7L9 328 aaPredicted RBP28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 ABCF3Q9NUQ8 709 aa28.49■■■□□ 2.15
CTDNEP1-210ENST00000574322 TRAFD1O14545 582 aaPredicted RBP28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 SOCS5O75159 536 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 KCNC3Q14003 757 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 TTC30BQ8N4P2 665 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 GPATCH11Q8N954 259 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 TSNARE1Q96NA8 513 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 MAGEE1Q9HCI5 957 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 NPHS2Q9NP85 383 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 CATSPERZQ9NTU4 200 aa28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 MRPS23Q9Y3D9 190 aaKnown RBP28.48■■■□□ 2.15
CTDNEP1-210ENST00000574322 OR51F1A6NGY5 319 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 G3V2L1 256 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 SLC9A3R1O14745 358 aaPredicted RBP28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 LINC01565O15544 149 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 BUD23O43709 281 aaKnown RBP28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 SERPINE1P05121 402 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 TSNAXIP1Q2TAA8 658 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 FUT11Q495W5 492 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 RBM20Q5T481 1227 aaKnown RBP28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 ARMC12Q5T9G4 340 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 AFTPHQ6ULP2 937 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 KIAA0907Q7Z7F0 614 aaPredicted RBP28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 C10orf107Q8IVU9 208 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 ADGRG2Q8IZP9 1017 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 OR4K2Q8NGD2 314 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 PIH1D2Q8WWB5 315 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 GPR78Q96P69 363 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 BBS2Q9BXC9 721 aa28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 NUP210Q8TEM1 1887 aaPredicted RBP28.47■■■□□ 2.15
CTDNEP1-210ENST00000574322 H7C0S8 307 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 KLHL2O95198 593 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 IGSF6O95976 241 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 DLDP09622 509 aaKnown RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SRCP12931 536 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 KCNA4P22459 653 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SLC8A1P32418 973 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SLC12A2P55011 1212 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 OVGP1Q12889 678 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 CCDC85BQ15834 202 aaPredicted RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 GALNTL6Q49A17 601 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 DGKKQ5KSL6 1271 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 ASTLQ6HA08 431 aaPredicted RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SDCCAG8Q86SQ7 713 aaPredicted RBP28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 MYO19Q96H55 970 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 TCF12Q99081 682 aa28.46■■■□□ 2.15
CTDNEP1-210ENST00000574322 SLC2A11Q9BYW1 496 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms