RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 KLQ9UEF7 1012 aa12.14□□□□□ -0.47
TRIM25-207ENST00000573108 CNOT8Q9UFF9 292 aaKnown RBP12.14□□□□□ -0.47
TRIM25-207ENST00000573108 PISDQ9UG56 409 aa12.14□□□□□ -0.47
TRIM25-207ENST00000573108 LOXL2Q9Y4K0 774 aa12.14□□□□□ -0.47
TRIM25-207ENST00000573108 AHCTF1Q8WYP5 2266 aa12.14□□□□□ -0.47
TRIM25-207ENST00000573108 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
TRIM25-207ENST00000573108 UNC13CQ8NB66 2214 aa12.14□□□□□ -0.47
TRIM25-207ENST00000573108 TLN1Q9Y490 2541 aaKnown RBP12.13□□□□□ -0.47
TRIM25-207ENST00000573108 FLNCQ14315 2725 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 TSPAN11A1L157 253 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 TMEM202A6NGA9 273 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 J3KR12 359 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 CREB3O43889 395 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 WISP1O95388 367 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 TPM3P06753 285 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 JMJD7P0C870 316 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 HTR1BP28222 390 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
TRIM25-207ENST00000573108 CCKBRP32239 447 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 MMP12P39900 470 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 ETV5P41161 510 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 RGRP47804 291 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 YBEYP58557 167 aaPredicted RBP12.13□□□□□ -0.47
TRIM25-207ENST00000573108 NFKB2Q00653 900 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 PPP1R2P3Q6NXS1 205 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 USP53Q70EK8 1073 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 TMPRSS9Q7Z410 1059 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 CAMK1DQ8IU85 385 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 CCNJLQ8IV13 435 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 VSTM4Q8IW00 320 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 OR1E3Q8WZA6 343 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 EXTL1Q92935 676 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 SGF29Q96ES7 293 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 WDR92Q96MX6 357 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIM25-207ENST00000573108 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 PDFQ9HBH1 243 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 FGF22Q9HCT0 170 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 MRPL40Q9NQ50 206 aaKnown RBP12.13□□□□□ -0.47
TRIM25-207ENST00000573108 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 UBA2Q9UBT2 640 aaPredicted RBP12.13□□□□□ -0.47
TRIM25-207ENST00000573108 ACSL6Q9UKU0 697 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
TRIM25-207ENST00000573108 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 ANKRD62A6NC57 917 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 TMX2-CTNND1H3BSU7 103 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 PRAMEF10O60809 474 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 TNFP01375 233 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 LIPCP11150 499 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 SUOXP51687 545 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 RALGDSQ12967 914 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 MTM1Q13496 603 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 AGERQ15109 404 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 PARP15Q460N3 678 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 EFHC2Q5JST6 749 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 CERCAMQ5T4B2 595 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 VASH2Q86V25 355 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 ZFAND4Q86XD8 727 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 UMODL1-AS1Q8N2C9 162 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 OR6C4Q8NGE1 309 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 OR8K1Q8NGG5 319 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 CCL4L1Q8NHW4 92 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 HCAR2Q8TDS4 363 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 TMEM74Q96NL1 305 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 LRRC19Q9H756 370 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 FZD10Q9ULW2 581 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 ATP8A1Q9Y2Q0 1164 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 DGKBQ9Y6T7 804 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 RNF215Q9Y6U7 377 aa12.12□□□□□ -0.47
TRIM25-207ENST00000573108 B4DGG1 531 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 NVLO15381 856 aaKnown RBP12.11□□□□□ -0.47
TRIM25-207ENST00000573108 GLB1P16278 677 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 GM2AP17900 193 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 WT1P19544 449 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-207ENST00000573108 PSMA2P25787 234 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 MAPK10P53779 464 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
TRIM25-207ENST00000573108 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-207ENST00000573108 ASTE1Q2TB18 679 aaPredicted RBP12.11□□□□□ -0.47
TRIM25-207ENST00000573108 CCDC122Q5T0U0 273 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 ALKBH5Q6P6C2 394 aaKnown RBP12.11□□□□□ -0.47
TRIM25-207ENST00000573108 OGFOD3Q6PK18 319 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 SPRED1Q7Z699 444 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 TAF8Q7Z7C8 310 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 PELI3Q8N2H9 469 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 FAM46DQ8NEK8 389 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 OR56A4Q8NGH8 313 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 ATL2Q8NHH9 583 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 USP7Q93009 1102 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 CELF6Q96J87 481 aaKnown RBP12.11□□□□□ -0.47
TRIM25-207ENST00000573108 DNAJC7Q99615 494 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 CHP1Q99653 195 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 LGR4Q9BXB1 951 aa12.11□□□□□ -0.47
TRIM25-207ENST00000573108 FAM117AQ9C073 453 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms