RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 IL27RAQ6UWB1 636 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 LIPIQ6XZB0 460 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 B4GALNT4Q76KP1 1039 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 PRPF39Q86UA1 669 aaKnown RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 TSPAN33Q86UF1 283 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 ZSCAN30Q86W11 494 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 GATAD2AQ86YP4 633 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 SLC25A45Q8N413 288 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 RYBPQ8N488 228 aaPredicted RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 KCTD6Q8NC69 237 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 PLA2G15Q8NCC3 412 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 EID2BQ96D98 161 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 COQ10AQ96MF6 247 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 WRAP53Q9BUR4 548 aaKnown RBP8.73□□□□□ -1.01
SMG6-210ENST00000572205 CEP41Q9BYV8 373 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 ATP13A3Q9H7F0 1226 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 NT5MQ9NPB1 228 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 DYRK4Q9NR20 520 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 AASDHPPTQ9NRN7 309 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 UCKL1Q9NWZ5 548 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 B4GALT6Q9UBX8 382 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 AMACRQ9UHK6 382 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 HS3ST3A1Q9Y663 406 aa8.73□□□□□ -1.01
SMG6-210ENST00000572205 CFAP69A5D8W1 941 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 A6NNZ2 444 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 K7ESM1 405 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 FLRT2O43155 660 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 HEXIM1O94992 359 aaKnown RBP8.72□□□□□ -1.01
SMG6-210ENST00000572205 PCDH8O95206 1070 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 CAPNS1P04632 268 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 CCNB1P14635 433 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 NME1P15531 152 aaKnown RBP8.72□□□□□ -1.01
SMG6-210ENST00000572205 PTPN3P26045 913 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 SSR1P43307 286 aaKnown RBP8.72□□□□□ -1.01
SMG6-210ENST00000572205 LIG3P49916 1009 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 BNIP3Q12983 259 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 KLF1Q13351 362 aaPredicted RBP8.72□□□□□ -1.01
SMG6-210ENST00000572205 LLGL1Q15334 1064 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 TEAD4Q15561 434 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 SWI5Q1ZZU3 235 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 MARC1Q5VT66 337 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 RFLNAQ6ZTI6 216 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 BBS12Q6ZW61 710 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
SMG6-210ENST00000572205 SLCO6A1Q86UG4 719 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 KLHDC8BQ8IXV7 354 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 CCDC13Q8IYE1 715 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 EXD1Q8NHP7 514 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 QKIQ96PU8 341 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMG6-210ENST00000572205 WDR24Q96S15 920 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 LYSMD1Q96S90 227 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 SEMA3CQ99985 751 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 TCEAL2Q9H3H9 227 aaPredicted RBP8.72□□□□□ -1.01
SMG6-210ENST00000572205 GDF3Q9NR23 364 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 DDX56Q9NY93 547 aaKnown RBP8.72□□□□□ -1.01
SMG6-210ENST00000572205 PCDHA3Q9Y5H8 950 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 APC2O95996 2303 aa8.72□□□□□ -1.01
SMG6-210ENST00000572205 A0A0J9YYE9 177 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.71□□□□□ -1.02
SMG6-210ENST00000572205 FAM221BA6H8Z2 402 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 CAPN8A6NHC0 703 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 TRIM38O00635 465 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 APOL1O14791 398 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 SPOPO43791 374 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 CST8O60676 142 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 SDC3O75056 442 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 PIAS2O75928 621 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 CPP00450 1065 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 TRBC1P01850 177 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 CELA2BP08218 269 aaPredicted RBP8.71□□□□□ -1.02
SMG6-210ENST00000572205 C1SP09871 688 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 ALPIP09923 528 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 FTH1P19P0C7X4 201 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 AKT2P31751 481 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 ACADVLP49748 655 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 RENBPP51606 427 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 DYNLT1P63172 113 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 FOXK2Q01167 660 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 RAD51Q06609 339 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 BCL2L1Q07817 233 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 ELP6Q0PNE2 266 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 NOMO1Q15155 1222 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 SPA17Q15506 151 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 SLC14A2Q15849 920 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 TFDP3Q5H9I0 405 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 TIGD7Q6NT04 549 aaPredicted RBP8.71□□□□□ -1.02
SMG6-210ENST00000572205 ESRP1Q6NXG1 681 aaKnown RBP8.71□□□□□ -1.02
SMG6-210ENST00000572205 KDELC1Q6UW63 502 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 MACC1Q6ZN28 852 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 Q6ZSR6 202 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 HSD11B1LQ7Z5J1 315 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 TECPR1Q7Z6L1 1165 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 DAAM2Q86T65 1068 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 TTC7BQ86TV6 843 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 MAP7D3Q8IWC1 876 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 RBFAQ8N0V3 343 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 IFT43Q96FT9 208 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 SCRN2Q96FV2 425 aa8.71□□□□□ -1.02
SMG6-210ENST00000572205 IMP4Q96G21 291 aaKnown RBP8.71□□□□□ -1.02
SMG6-210ENST00000572205 HES6Q96HZ4 224 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms