RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 LLGL1Q15334 1064 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 PPP2R5EQ16537 467 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 KAZNQ674X7 775 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 CCDC50Q8IVM0 306 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 NDUFAF2Q8N183 169 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 CBARPQ8N350 705 aaPredicted RBP12.71□□□□□ -0.37
TVP23B-204ENST00000571018 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.71□□□□□ -0.37
TVP23B-204ENST00000571018 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 ADAMTS14Q8WXS8 1223 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 MCCC1Q96RQ3 725 aaPredicted RBP12.71□□□□□ -0.37
TVP23B-204ENST00000571018 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 TDRD1Q9BXT4 1180 aaKnown RBP12.71□□□□□ -0.37
TVP23B-204ENST00000571018 DNAJC28Q9NX36 388 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 SAE1Q9UBE0 346 aaPredicted RBP12.71□□□□□ -0.37
TVP23B-204ENST00000571018 FTSJ1Q9UET6 329 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 TTLL3Q9Y4R7 772 aa12.71□□□□□ -0.37
TVP23B-204ENST00000571018 COL5A1P20908 1838 aaPredicted RBP12.71□□□□□ -0.38
TVP23B-204ENST00000571018 KNL1Q8NG31 2342 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 CCDC66A2RUB6 948 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 GRID2IPA4D2P6 1211 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 NPIPB15A6NHN6 443 aaPredicted RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 H3BM21 787 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 PSMD11O00231 422 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 HEXIM1O94992 359 aaKnown RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 TOP3BO95985 862 aaKnown RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 PRLP01236 227 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 MMP2P08253 660 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 GIMD1P0DJR0 217 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 PECAM1P16284 738 aaPredicted RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 CA4P22748 312 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 LHCGRP22888 699 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 RPL26P61254 145 aaKnown RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 MTM1Q13496 603 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 ACOX1Q15067 660 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 PRKD1Q15139 912 aaPredicted RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 CNGA3Q16281 694 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 MACC1Q6ZN28 852 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 BBS12Q6ZW61 710 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 USP45Q70EL2 814 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 RAB44Q7Z6P3 723 aaPredicted RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 PNPLA1Q8N8W4 532 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 P3H4Q92791 437 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 COQ10AQ96MF6 247 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 APOOQ9BUR5 198 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 CAAP1Q9H8G2 361 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 UCKL1Q9NWZ5 548 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 KCTD5Q9NXV2 234 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 TRIM10Q9UDY6 481 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 KLF15Q9UIH9 416 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 RPL26L1Q9UNX3 145 aaKnown RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 CHKBQ9Y259 395 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 EFR3BQ9Y2G0 817 aa12.7□□□□□ -0.38
TVP23B-204ENST00000571018 CNOT1A5YKK6 2376 aaKnown RBP12.7□□□□□ -0.38
TVP23B-204ENST00000571018 A0A0J9YYE9 177 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 A0A0U1RQJ8 604 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 MACROD2A1Z1Q3 448 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 NEMP2A6NFY4 417 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 TRIM38O00635 465 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 ENC1O14682 589 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 HYAL3O43820 417 aaPredicted RBP12.69□□□□□ -0.38
TVP23B-204ENST00000571018 TRBC1P01850 177 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 ALPIP09923 528 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 JUNDP17535 347 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 CTPS1P17812 591 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 HNF1BP35680 557 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 TRIM23P36406 574 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 CD86P42081 329 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 RWDD2BP57060 319 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 SKOR1P84550 965 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 ZNF211Q13398 564 aaPredicted RBP12.69□□□□□ -0.38
TVP23B-204ENST00000571018 ARHGEF7Q14155 803 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 PTPRRQ15256 657 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 TEX44Q53QW1 395 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 ESRP1Q6NXG1 681 aaKnown RBP12.69□□□□□ -0.38
TVP23B-204ENST00000571018 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 NT5DC3Q86UY8 548 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 CHCHD4Q8N4Q1 142 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 PLA2G15Q8NCC3 412 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 OR4C6Q8NH72 309 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 TFB1MQ8WVM0 346 aaKnown RBP12.69□□□□□ -0.38
TVP23B-204ENST00000571018 BTN2A2Q8WVV5 523 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 IMP4Q96G21 291 aaKnown RBP12.69□□□□□ -0.38
TVP23B-204ENST00000571018 AGAP3Q96P47 875 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 HEMGNQ9BXL5 484 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 CEP41Q9BYV8 373 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 PNMA8BQ9ULN7 279 aaPredicted RBP12.69□□□□□ -0.38
TVP23B-204ENST00000571018 OR1A2Q9Y585 309 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 CSNK1G3Q9Y6M4 447 aa12.69□□□□□ -0.38
TVP23B-204ENST00000571018 CABIN1Q9Y6J0 2220 aa12.68□□□□□ -0.38
TVP23B-204ENST00000571018 LRRK1Q38SD2 2015 aa12.68□□□□□ -0.38
TVP23B-204ENST00000571018 FAM221BA6H8Z2 402 aa12.68□□□□□ -0.38
TVP23B-204ENST00000571018 SCAMP1O15126 338 aa12.68□□□□□ -0.38
TVP23B-204ENST00000571018 MTSS1O43312 755 aa12.68□□□□□ -0.38
TVP23B-204ENST00000571018 SIGLEC6O43699 453 aa12.68□□□□□ -0.38
TVP23B-204ENST00000571018 PCCBP05166 539 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms