RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TMPRSS9Q7Z410 1059 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 IRF2BP2Q7Z5L9 587 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 VASH2Q86V25 355 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 GPR156Q8NFN8 814 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 OR56A4Q8NGH8 313 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 ATL2Q8NHH9 583 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 HCAR2Q8TDS4 363 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 PDCD6IPQ8WUM4 868 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 JPH3Q8WXH2 748 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 LIN37Q96GY3 246 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 ERGIC2Q96RQ1 377 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 TUBGCP5Q96RT8 1024 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 CCNL2Q96S94 520 aaPredicted RBP8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 RBM15Q96T37 977 aaKnown RBP eCLIP8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 HSD3B7Q9H2F3 369 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 RDH14Q9HBH5 336 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 PARVAQ9NVD7 372 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 ANO10Q9NW15 660 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 GOLGA6AQ9NYA3 693 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 CWC15Q9P013 229 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 LRIT1Q9P2V4 623 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 MYO1AQ9UBC5 1043 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 SSUH2Q9Y2M2 353 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 LOXL2Q9Y4K0 774 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 PCDHGC4Q9Y5F7 938 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 DGKBQ9Y6T7 804 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 PRAMEF33A0A0G2JMD5 474 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 B8ZZF3 427 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 TRAFD1O14545 582 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 PRPSAP2O60256 369 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 PRAMEF10O60809 474 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 RNF8O76064 485 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 FTLP02792 175 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 TCF4P15884 667 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 GLB1P16278 677 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 AMPD1P23109 780 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 ALDH4A1P30038 563 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 CSNK1DP48730 415 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 OR1D5P58170 312 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 KIAA1024LP59773 190 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 ARHGEF7Q14155 803 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 LBRQ14739 615 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 AGERQ15109 404 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 STX1AQ16623 288 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 SMTNL2Q2TAL5 461 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 C14orf28Q4W4Y0 310 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 CERCAMQ5T4B2 595 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 AFMIDQ63HM1 303 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 E4F1Q66K89 784 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 SPECC1LQ69YQ0 1117 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 PLEKHA7Q6IQ23 1121 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 PNCKQ6P2M8 343 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 DOK6Q6PKX4 331 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 RBM43Q6ZSC3 357 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 CYP4V2Q6ZWL3 525 aaPredicted RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 DPPA4Q7L190 304 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 SPRED1Q7Z699 444 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZFAND4Q86XD8 727 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 AOPEPQ8N6M6 819 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 PTCD2Q8WV60 388 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 SNRNP27Q8WVK2 155 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 USP7Q93009 1102 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 ECHDC3Q96DC8 303 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 MED8Q96G25 268 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 WBP1Q96G27 269 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 TMEM74Q96NL1 305 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 SYT11Q9BT88 431 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 SEMA6CQ9H3T2 930 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 WDR26Q9H7D7 661 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 CARS2Q9HA77 564 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 SPATS2LQ9NUQ6 558 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 DONSONQ9NYP3 566 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 FOXJ2Q9P0K8 574 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 B4GALT6Q9UBX8 382 aa8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 CNOT8Q9UFF9 292 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 TLN1Q9Y490 2541 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-203ENST00000570385 MYO18BQ8IUG5 2567 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 PRSS38A1L453 326 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 TMEM191CA6NGB0 347 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 LRRC10BA6NIK2 292 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 LRRC53A6NM62 1247 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 B4GAT1O43505 415 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 SLC28A2O43868 658 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 LRCH4O75427 683 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 FUCA1P04066 466 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 CCDC172P0C7W6 258 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 SKILP12757 684 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 CTPS1P17812 591 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 KELP23276 732 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 MPSTP25325 297 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 AK4P27144 223 aaPredicted RBP8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 IL1R2P27930 398 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 CCKBRP32239 447 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 HTR7P34969 479 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 ETV3P41162 512 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 MLLT3P42568 568 aaPredicted RBP8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 GNPDA1P46926 289 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 POLD2P49005 469 aa8.62□□□□□ -1.03
CTDNEP1-203ENST00000570385 MAXP61244 160 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms