RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 CDRT15L2A8MXV6 281 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 PDE2AO00408 941 aaPredicted RBP13.18□□□□□ -0.3
SPG7-221ENST00000569720 TEX33O43247 280 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 RPLP0P05388 317 aaKnown RBP13.18□□□□□ -0.3
SPG7-221ENST00000569720 ITGA2BP08514 1039 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 GZMAP12544 262 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 MIPP30301 263 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 RGRP47804 291 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 HCAR3P49019 387 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 INHBCP55103 352 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 AP1S1P61966 158 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 SKOR1P84550 965 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 LBRQ14739 615 aaKnown RBP13.18□□□□□ -0.3
SPG7-221ENST00000569720 TMCO4Q5TGY1 634 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 AFMIDQ63HM1 303 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 LIPIQ6XZB0 460 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 DPPA4Q7L190 304 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 RAB11FIP2Q7L804 512 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 TAF8Q7Z7C8 310 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 CLEC14AQ86T13 490 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 ARHGAP12Q8IWW6 846 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 FBXO39Q8N4B4 442 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 OR56A4Q8NGH8 313 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 PDXPQ96GD0 296 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 TMEM74Q96NL1 305 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 ZNF599Q96NL3 588 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 PEBP4Q96S96 227 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 SYT11Q9BT88 431 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 ZWILCHQ9H900 591 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 MRPL47Q9HD33 250 aaKnown RBP13.18□□□□□ -0.3
SPG7-221ENST00000569720 KCTD5Q9NXV2 234 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 CNOT8Q9UFF9 292 aaKnown RBP13.18□□□□□ -0.3
SPG7-221ENST00000569720 SEPT3Q9UH03 358 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 ATMQ13315 3056 aa13.18□□□□□ -0.3
SPG7-221ENST00000569720 D6RAR5 112 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 TNFRSF10CO14798 259 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 PLD2O14939 933 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 FTLP02792 175 aaPredicted RBP13.17□□□□□ -0.3
SPG7-221ENST00000569720 HOXC4P09017 264 aaPredicted RBP13.17□□□□□ -0.3
SPG7-221ENST00000569720 HSPA9P38646 679 aaKnown RBP13.17□□□□□ -0.3
SPG7-221ENST00000569720 ARL4AP40617 200 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 PDX1P52945 283 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 CCL7P80098 99 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 RALGDSQ12967 914 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 ZNF235Q14590 738 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 ACOX1Q15067 660 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
SPG7-221ENST00000569720 CCDC81Q6ZN84 652 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 VSTM4Q8IW00 320 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 BBS5Q8N3I7 341 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 ZNF843Q8N446 348 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 ARFGAP1Q8N6T3 406 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 FAM46DQ8NEK8 389 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 GPR156Q8NFN8 814 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
SPG7-221ENST00000569720 OR1E3Q8WZA6 343 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
SPG7-221ENST00000569720 ZNF653Q96CK0 615 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 PSKH2Q96QS6 385 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 MOSPD1Q9UJG1 213 aa13.17□□□□□ -0.3
SPG7-221ENST00000569720 ARHGEF17Q96PE2 2063 aaPredicted RBP13.17□□□□□ -0.3
SPG7-221ENST00000569720 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 H3BRJ5 948 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 CASC3O15234 703 aaKnown RBP13.16□□□□□ -0.3
SPG7-221ENST00000569720 SOCS5O75159 536 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 LRCH4O75427 683 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 JMJD7P0C870 316 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 MYBL1P10243 752 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 PNLIPP16233 465 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 GLB1P16278 677 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 UGT1A5P35504 534 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 TRIM23P36406 574 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 KLHL30Q0D2K2 578 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 ARHGEF7Q14155 803 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 PNCKQ6P2M8 343 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 PCSK4Q6UW60 755 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 ARHGAP36Q6ZRI8 547 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 ZNF571Q7Z3V5 609 aaPredicted RBP13.16□□□□□ -0.3
SPG7-221ENST00000569720 JAMLQ86YT9 394 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 CCNJLQ8IV13 435 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 NPWQ8N729 165 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 Q8N9G6 341 aaPredicted RBP13.16□□□□□ -0.3
SPG7-221ENST00000569720 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 NSMCE1Q8WV22 266 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 SYN2Q92777 582 aaPredicted RBP13.16□□□□□ -0.3
SPG7-221ENST00000569720 DPEP2Q9H4A9 486 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 CYP4F12Q9HCS2 524 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 AIPL1Q9NZN9 384 aa13.16□□□□□ -0.3
SPG7-221ENST00000569720 CWC15Q9P013 229 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms