RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CARD9Q9H257 536 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 MBNL1Q9NR56 388 aaKnown RBP12.85□□□□□ -0.35
CDT1-203ENST00000569140 TM7SF3Q9NS93 570 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 FAM153AQ9UHL3 310 aa12.85□□□□□ -0.35
CDT1-203ENST00000569140 TP53BP1Q12888 1972 aaPredicted RBP12.85□□□□□ -0.35
CDT1-203ENST00000569140 A0A0J9YYE9 177 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 C1orf232A0A0U1RR37 186 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 DCDC2BA2VCK2 349 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 USP27XA6NNY8 438 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 FZD6O60353 706 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 TRBC1P01850 177 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 FGGP02679 453 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 LHCGRP22888 699 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 CD68P34810 354 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 RABIFP47224 123 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 ARRB1P49407 418 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 CDK18Q07002 472 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 OVGP1Q12889 678 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 PRPSAP1Q14558 356 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 LONRF2Q1L5Z9 754 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 LRRC66Q68CR7 880 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 HSD11B1LQ7Z5J1 315 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 SPATS2Q86XZ4 545 aaKnown RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 SLC25A41Q8N5S1 370 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 FAM71DQ8N9W8 422 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 TP53I13Q8NBR0 393 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 SETD7Q8WTS6 366 aaKnown RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 C1orf54Q8WWF1 131 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 ASB12Q8WXK4 309 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 SCRN2Q96FV2 425 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 LENG8Q96PV6 779 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 ELF4Q99607 663 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 KLF6Q99612 283 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 TMEM121Q9BTD3 319 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 MLPHQ9BV36 600 aaPredicted RBP12.84□□□□□ -0.35
CDT1-203ENST00000569140 GBA3Q9H227 469 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 JRKLQ9Y4A0 524 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 HS3ST3A1Q9Y663 406 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 TMEM131Q92545 1883 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 TRPM6Q9BX84 2022 aa12.84□□□□□ -0.35
CDT1-203ENST00000569140 SDC3O75056 442 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 ZNF189O75820 626 aaPredicted RBP12.83□□□□□ -0.36
CDT1-203ENST00000569140 PIRTP0C851 137 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 PSMB4P28070 264 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 ETV3P41162 512 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 GEMP55040 296 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 WNT3AP56704 352 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 RPL26P61254 145 aaKnown RBP12.83□□□□□ -0.36
CDT1-203ENST00000569140 PUM1Q14671 1186 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDT1-203ENST00000569140 QPCTQ16769 361 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 WSCD2Q2TBF2 565 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 ZNF542PQ5EBM4 170 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 RAET1GQ6H3X3 334 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 CRTC1Q6UUV9 634 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 ABI3BPQ7Z7G0 1075 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 OXR1Q8N573 874 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 FAM174AQ8TBP5 190 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 MAIP1Q8WWC4 291 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 CENPTQ96BT3 561 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 BMFQ96LC9 184 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 SPATA13Q96N96 652 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 FCRL5Q96RD9 977 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 MCCC1Q96RQ3 725 aaPredicted RBP12.83□□□□□ -0.36
CDT1-203ENST00000569140 FICDQ9BVA6 458 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 DNAAF2Q9NVR5 837 aaKnown RBP12.83□□□□□ -0.36
CDT1-203ENST00000569140 DNAJC28Q9NX36 388 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 CD84Q9UIB8 345 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 RPL26L1Q9UNX3 145 aaKnown RBP12.83□□□□□ -0.36
CDT1-203ENST00000569140 ZNF148Q9UQR1 794 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 OR1A2Q9Y585 309 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDT1-203ENST00000569140 DOCK9Q9BZ29 2069 aa12.83□□□□□ -0.36
CDT1-203ENST00000569140 PI4KAP42356 2102 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 A0A1B0GTQ1 180 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 CFAP69A5D8W1 941 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 ANKRD66B4E2M5 251 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 LIASO43766 372 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 DFNA5O60443 496 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 ANXA9O76027 345 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 CLDN7O95471 211 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 NDST3O95803 873 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 PRLP01236 227 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 IFNB1P01574 187 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 ATP1A1P05023 1023 aaKnown RBP12.82□□□□□ -0.36
CDT1-203ENST00000569140 ITGAVP06756 1048 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 ZNF30P17039 623 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 ACTN2P35609 894 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 NOVA1P51513 510 aaKnown RBP12.82□□□□□ -0.36
CDT1-203ENST00000569140 GDF10P55107 478 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 GNG11P61952 73 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 MPP3Q13368 585 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 PTK2BQ14289 1009 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 INPP5AQ14642 412 aa12.82□□□□□ -0.36
CDT1-203ENST00000569140 SUZ12Q15022 739 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms