RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ABHD17AQ96GS6 310 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 NOL6Q9H6R4 1146 aaKnown RBP12.52□□□□□ -0.41
SNX29-207ENST00000568949 CYP4F12Q9HCS2 524 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 SPATS2LQ9NUQ6 558 aaKnown RBP12.52□□□□□ -0.41
SNX29-207ENST00000568949 SLC39A1Q9NY26 324 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 LHX3Q9UBR4 397 aa12.52□□□□□ -0.41
SNX29-207ENST00000568949 PRSS38A1L453 326 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 NKX2-8O15522 239 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 RECQL5O94762 991 aaPredicted RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 LSM8O95777 96 aaKnown RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 FGF1P05230 155 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 PNMA6AP0CW24 399 aaPredicted RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 THRAP10827 490 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 CYP11B1P15538 503 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 CSTF2P33240 577 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNX29-207ENST00000568949 CDC20Q12834 499 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 CYTH1Q15438 398 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 LACTB2Q53H82 288 aaPredicted RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 CFAP58Q5T655 872 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 DCAF12Q5T6F0 453 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 RTL3Q8N8U3 475 aaKnown RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 NETO2Q8NC67 525 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 TEFMQ96QE5 360 aaKnown RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 TUBGCP5Q96RT8 1024 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 GSDMCQ9BYG8 508 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 KLC2Q9H0B6 622 aa12.51□□□□□ -0.41
SNX29-207ENST00000568949 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
SNX29-207ENST00000568949 ECEL1O95672 775 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 MAP4P27816 1152 aaKnown RBP12.5□□□□□ -0.41
SNX29-207ENST00000568949 SDC4P31431 198 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 MC1RQ01726 317 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 ILF3Q12906 894 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNX29-207ENST00000568949 KLRB1Q12918 225 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 RALGDSQ12967 914 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 BIRC2Q13490 618 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 PEX6Q13608 980 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 SEPT6Q14141 434 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 CRTC2Q53ET0 693 aaPredicted RBP12.5□□□□□ -0.41
SNX29-207ENST00000568949 RAB6CQ53S08 254 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 AFMIDQ63HM1 303 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 STRADAQ7RTN6 431 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 NRROSQ86YC3 692 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 NLGN4XQ8N0W4 816 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 EMC1Q8N766 993 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 NLGN4YQ8NFZ3 816 aaPredicted RBP12.5□□□□□ -0.41
SNX29-207ENST00000568949 NTAN1Q96AB6 310 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 EXOC2Q96KP1 924 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 LGR4Q9BXB1 951 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 MAGEB5Q9BZ81 275 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 SPRY4Q9C004 299 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 RAB6CQ9H0N0 254 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 METTL5Q9NRN9 209 aaKnown RBP12.5□□□□□ -0.41
SNX29-207ENST00000568949 TRNAU1APQ9NX07 287 aaKnown RBP12.5□□□□□ -0.41
SNX29-207ENST00000568949 TAAR2Q9P1P5 351 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 MOSPD1Q9UJG1 213 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 PILRAQ9UKJ1 303 aa12.5□□□□□ -0.41
SNX29-207ENST00000568949 NBPF19A0A087WUL8 3843 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 IGHV1OR21-1A0A087WYE8 117 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 PRR19A6NJB7 356 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 WASH4PA8MWX3 477 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 RASA4BC9J798 803 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 RASA4O43374 803 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 DUX1O43812 170 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 BUB1BO60566 1050 aaPredicted RBP12.49□□□□□ -0.41
SNX29-207ENST00000568949 PRKAR1AP10644 381 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 MYCLP1P12525 358 aaPredicted RBP12.49□□□□□ -0.41
SNX29-207ENST00000568949 PTPN9P43378 593 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 CSNK1DP48730 415 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 RAPGEF1Q13905 1077 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 CDO1Q16878 200 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 C15orf59Q2T9L4 293 aaPredicted RBP12.49□□□□□ -0.41
SNX29-207ENST00000568949 PARP15Q460N3 678 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 TMEM71Q6P5X7 295 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 LIPIQ6XZB0 460 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 ZSWIM9Q86XI8 627 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 CAMK1DQ8IU85 385 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 CREBRFQ8IUR6 639 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 RXFP2Q8WXD0 754 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 CENPIQ92674 756 aaPredicted RBP12.49□□□□□ -0.41
SNX29-207ENST00000568949 CARS2Q9HA77 564 aaKnown RBP12.49□□□□□ -0.41
SNX29-207ENST00000568949 OCIAD1Q9NX40 245 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 PDP2Q9P2J9 529 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 UBA2Q9UBT2 640 aaPredicted RBP12.49□□□□□ -0.41
SNX29-207ENST00000568949 PLEKHB1Q9UF11 243 aaPredicted RBP12.49□□□□□ -0.41
SNX29-207ENST00000568949 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
SNX29-207ENST00000568949 LOC101059948A0A1B0GTJ6 334 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 ENO4A6NNW6 628 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 EFCAB7A8K855 629 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 BIN1O00499 593 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 PPM1DO15297 605 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 MTSS1O43312 755 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 PRKCGP05129 697 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 ELFN1P0C7U0 828 aa12.48□□□□□ -0.41
SNX29-207ENST00000568949 GM2AP17900 193 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms