RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 TREX2Q9BQ50 279 aaPredicted RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 HAUS8Q9BT25 410 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 PDZD7Q9H5P4 517 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 FBRSL1Q9HCM7 1045 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 BPIFA1Q9NP55 256 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 TBC1D22BQ9NU19 505 aa4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 CNOT8Q9UFF9 292 aaKnown RBP4.9□□□□□ -1.63
SHCBP1-206ENST00000567698 RNASEH2AO75792 299 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 CCNDBP1O95273 360 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 OR2C1O95371 312 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 BMP15O95972 392 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 ZNF12P17014 697 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 MAOAP21397 527 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 MLH1P40692 756 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 EIF2S3P41091 472 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 UBA7P41226 1012 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 F2RL1P55085 397 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 FOXG1P55316 489 aaPredicted RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 CRYZQ08257 329 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 DPCR1Q3MIW9 517 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 CDONQ4KMG0 1287 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 SOWAHCQ53LP3 525 aaPredicted RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 TDRD12Q587J7 1177 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 LRCH2Q5VUJ6 765 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 ARHGAP12Q8IWW6 846 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 AGBL3Q8NEM8 1001 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 NSMCE1Q8WV22 266 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 ARHGEF2Q92974 986 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 BARD1Q99728 777 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 MMP25Q9NPA2 562 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 MAP3K20Q9NYL2 800 aaKnown RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 TINAGQ9UJW2 476 aa4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 FBXO9Q9UK97 447 aaPredicted RBP4.89□□□□□ -1.63
SHCBP1-206ENST00000567698 IGLV5-52A0A0A0MRZ9 124 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 MYMKA6NI61 221 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 SRRM3A6NNA2 597 aaPredicted RBP4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 PRSS47A8MTI9 375 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 A8MZ25 164 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 ASAP2O43150 1006 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 DDNO94850 711 aaPredicted RBP4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 ALPLP05186 524 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 ACADMP11310 421 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 RARGP13631 454 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 IL7RP16871 459 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 GPTP24298 496 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 HADHAP40939 763 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 HTR6P50406 440 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 KRTAP10-11P60412 298 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 LMOD3Q0VAK6 560 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 ITGADQ13349 1161 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 NAE1Q13564 534 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 DRAP1Q14919 205 aaPredicted RBP4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 EIF2S3LQ2VIR3 472 aaKnown RBP4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 C6orf141Q5SZD1 244 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 B3GNT6Q6ZMB0 384 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 WDTC1Q8N5D0 677 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 FRMD1Q8N878 549 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 SCCPDHQ8NBX0 429 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 IGSF8Q969P0 613 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 SLC25A33Q9BSK2 321 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 PLEKHA5Q9HAU0 1116 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 KRT84Q9NSB2 600 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 DIAPH3Q9NSV4 1193 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 CORO1CQ9ULV4 474 aaPredicted RBP4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 MYO6Q9UM54 1294 aa4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 AAR2Q9Y312 384 aaKnown RBP4.88□□□□□ -1.63
SHCBP1-206ENST00000567698 FRMD3A2A2Y4 597 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 TTC36A6NLP5 189 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 AGAP14A8MT82 685 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 SMAD6O43541 496 aaKnown RBP4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 ZIC3O60481 467 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 NDUFS7O75251 213 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 NKX2-2O95096 273 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 HOXC6P09630 235 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 CDH2P19022 906 aaPredicted RBP4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 GARSP41250 739 aaKnown RBP4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 CLCN3P51790 818 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 SORDQ00796 357 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 NIPAL4Q0D2K0 466 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 KRT24Q2M2I5 525 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 PAPPA-AS1Q5QFB9 102 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 FAM205BPQ63HN1 556 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 MZT2BQ6NZ67 158 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 TMED8Q6PL24 325 aaPredicted RBP4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 PQLC2Q6ZP29 291 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 OTULINQ96BN8 352 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 PHF21BQ96EK2 531 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 LRFN5Q96NI6 719 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 ZNF570Q96NI8 536 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 SF3B5Q9BWJ5 86 aaKnown RBP4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 SEPT11Q9NVA2 429 aaKnown RBP4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 HCFC1R1Q9NWW0 138 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 DLGAP2Q9P1A6 1054 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 CDC14AQ9UNH5 594 aa4.87□□□□□ -1.63
SHCBP1-206ENST00000567698 A0A0U1RQJ8 604 aa4.86□□□□□ -1.63
SHCBP1-206ENST00000567698 EIF3CLB5ME19 914 aaKnown RBP4.86□□□□□ -1.63
SHCBP1-206ENST00000567698 G6PDP11413 515 aa4.86□□□□□ -1.63
SHCBP1-206ENST00000567698 SCP2P22307 547 aa4.86□□□□□ -1.63
SHCBP1-206ENST00000567698 RPL3P39023 403 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms