RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 CCNE2O96020 404 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SERPINA1P01009 418 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CST1P01037 141 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 INHAP05111 366 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SERPIND1P05546 499 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ZSCAN5DPP0CG00 497 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 HGFP14210 728 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CDKN2BP42772 138 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ASMTP46597 345 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SCNN1BP51168 640 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 BLVRAP53004 296 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ACLYP53396 1101 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 USP46P62068 366 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CREMQ03060 361 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 MVKQ03426 396 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 FOXM1Q08050 763 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ACAP2Q15057 778 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NRF1Q16656 503 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 RBM20Q5T481 1227 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 C16orf46Q6P387 395 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 DCLRE1AQ6PJP8 1040 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 KLHL17Q6TDP4 642 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CCDC149Q6ZUS6 474 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 FAM183BPQ6ZVS7 135 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SLC26A9Q7LBE3 791 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 DSG4Q86SJ6 1040 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 AKAP14Q86UN6 197 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SCUBE3Q8IX30 993 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CPSF7Q8N684 471 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 BANPQ8N9N5 519 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF540Q8NDQ6 660 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 PIK3R3Q92569 461 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 KAT2BQ92831 832 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CLPTM1LQ96KA5 538 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NLNQ9BYT8 704 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 RACGAP1Q9H0H5 632 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SDCBP2Q9H190 292 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 PRDM12Q9H4Q4 367 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 PCDH18Q9HCL0 1135 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 GIN1Q9NXP7 522 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 XPR1Q9UBH6 696 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 HMGXB4Q9UGU5 601 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF112Q9UJU3 913 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 IKZF3Q9UKT9 509 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 WBP11Q9Y2W2 641 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 TNS1Q9HBL0 1735 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 RREB1Q92766 1687 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 PIPSLA2A3N6 862 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 KCNK1O00180 336 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SIN3BO75182 1162 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 PGM3O95394 542 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 DHFRP00374 187 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 PFKMP08237 780 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 GSTM1P09488 218 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 MBL2P11226 248 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 COX7A2P14406 83 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 RFC2P35250 354 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 GUCA1AP43080 201 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 YBEYP58557 167 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 RPS7P62081 194 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 BCL2L1Q07817 233 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 DDX39BQ13838 428 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SPIDRQ14159 915 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ARSHQ5FYA8 562 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 LDLRAD1Q5T700 205 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF57Q68EA5 555 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 USP45Q70EL2 814 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ERI1Q8IV48 349 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SLC30A8Q8IWU4 369 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CHCHD4Q8N4Q1 142 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 POC5Q8NA72 575 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 LPCAT1Q8NF37 534 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 IPCEF1Q8WWN9 437 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SELENOMQ8WWX9 145 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CPT1BQ92523 772 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NTPCRQ9BSD7 190 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 CHID1Q9BWS9 393 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NMUR2Q9GZQ4 415 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 WBP1LQ9NX94 342 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 GRHL1Q9NZI5 618 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 EHD3Q9NZN3 535 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 TRPS1Q9UHF7 1281 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 VPS4AQ9UN37 437 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ZNF232Q9UNY5 417 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 GNEQ9Y223 722 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 SLC9A8Q9Y2E8 581 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NCF1BA6NI72 391 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NCF1CA8MVU1 366 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 TAF4O00268 1085 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 PLIN3O60664 434 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 FTH1P02794 183 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 ALDH2P05091 517 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 C2P06681 752 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NCF1P14598 390 aaPredicted RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 MARCKSL1P49006 195 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 TAS2R40P59535 323 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 MRPS5P82675 430 aaKnown RBP4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 TAF5Q15542 800 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 DPY19L1Q2PZI1 675 aa4.36□□□□□ -1.71
LPCAT2-208ENST00000566915 NDUFAF6Q330K2 333 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms