RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TMEM202A6NGA9 273 aa15.04■□□□□ -0
RNF40-209ENST00000566703 D6RAR5 112 aa15.04■□□□□ -0
RNF40-209ENST00000566703 H3BRJ5 948 aa15.04■□□□□ -0
RNF40-209ENST00000566703 DDX3XO00571 662 aaKnown RBP eCLIP15.04■□□□□ -0
RNF40-209ENST00000566703 HTRA2O43464 458 aaPredicted RBP15.04■□□□□ -0
RNF40-209ENST00000566703 SOCS5O75159 536 aa15.04■□□□□ -0
RNF40-209ENST00000566703 LRCH4O75427 683 aa15.04■□□□□ -0
RNF40-209ENST00000566703 PRKCGP05129 697 aa15.04■□□□□ -0
RNF40-209ENST00000566703 RPLP0P05388 317 aaKnown RBP15.04■□□□□ -0
RNF40-209ENST00000566703 TYRO3Q06418 890 aa15.04■□□□□ -0
RNF40-209ENST00000566703 DPYSQ14117 519 aa15.04■□□□□ -0
RNF40-209ENST00000566703 RALGPS1Q5JS13 557 aa15.04■□□□□ -0
RNF40-209ENST00000566703 PNCKQ6P2M8 343 aa15.04■□□□□ -0
RNF40-209ENST00000566703 FOXR1Q6PIV2 292 aa15.04■□□□□ -0
RNF40-209ENST00000566703 TAF8Q7Z7C8 310 aa15.04■□□□□ -0
RNF40-209ENST00000566703 CBARPQ8N350 705 aaPredicted RBP15.04■□□□□ -0
RNF40-209ENST00000566703 NPWQ8N729 165 aa15.04■□□□□ -0
RNF40-209ENST00000566703 FAM46DQ8NEK8 389 aa15.04■□□□□ -0
RNF40-209ENST00000566703 PDXPQ96GD0 296 aa15.04■□□□□ -0
RNF40-209ENST00000566703 SYNDIG1Q9H7V2 258 aa15.04■□□□□ -0
RNF40-209ENST00000566703 LAMA5O15230 3695 aa15.04■□□□□ -0
RNF40-209ENST00000566703 CELSR3Q9NYQ7 3312 aa15.04■□□□□ -0
RNF40-209ENST00000566703 NBEAQ8NFP9 2946 aa15.04■□□□□ -0
RNF40-209ENST00000566703 COL27A1Q8IZC6 1860 aaPredicted RBP15.03■□□□□ -0
RNF40-209ENST00000566703 IGSF10Q6WRI0 2623 aa15.03■□□□□ -0
RNF40-209ENST00000566703 RP1P56715 2156 aa15.03■□□□□ -0
RNF40-209ENST00000566703 ATMINO43313 823 aaPredicted RBP15.03■□□□□ -0
RNF40-209ENST00000566703 NUDT21O43809 227 aaKnown RBP15.03■□□□□ -0
RNF40-209ENST00000566703 GM2AP17900 193 aa15.03■□□□□ -0
RNF40-209ENST00000566703 CR2P20023 1033 aa15.03■□□□□ -0
RNF40-209ENST00000566703 UGT1A5P35504 534 aa15.03■□□□□ -0
RNF40-209ENST00000566703 ARL4AP40617 200 aa15.03■□□□□ -0
RNF40-209ENST00000566703 ZFP36L1Q07352 338 aaKnown RBP15.03■□□□□ -0
RNF40-209ENST00000566703 KLHL30Q0D2K2 578 aa15.03■□□□□ -0
RNF40-209ENST00000566703 SLC10A7Q0GE19 358 aa15.03■□□□□ -0
RNF40-209ENST00000566703 CLN3Q13286 438 aa15.03■□□□□ -0
RNF40-209ENST00000566703 DPYSL2Q16555 572 aa15.03■□□□□ -0
RNF40-209ENST00000566703 C14orf28Q4W4Y0 310 aa15.03■□□□□ -0
RNF40-209ENST00000566703 CERCAMQ5T4B2 595 aa15.03■□□□□ -0
RNF40-209ENST00000566703 ARHGAP36Q6ZRI8 547 aa15.03■□□□□ -0
RNF40-209ENST00000566703 B3GNT8Q7Z7M8 397 aa15.03■□□□□ -0
RNF40-209ENST00000566703 CCNJLQ8IV13 435 aa15.03■□□□□ -0
RNF40-209ENST00000566703 BBS5Q8N3I7 341 aa15.03■□□□□ -0
RNF40-209ENST00000566703 TTC9Q92623 222 aa15.03■□□□□ -0
RNF40-209ENST00000566703 COQ10AQ96MF6 247 aa15.03■□□□□ -0
RNF40-209ENST00000566703 NUDCD1Q96RS6 583 aa15.03■□□□□ -0
RNF40-209ENST00000566703 TRIM7Q9C029 511 aa15.03■□□□□ -0
RNF40-209ENST00000566703 ISCUQ9H1K1 167 aa15.03■□□□□ -0
RNF40-209ENST00000566703 WDR26Q9H7D7 661 aa15.03■□□□□ -0
RNF40-209ENST00000566703 EPB41L5Q9HCM4 733 aa15.03■□□□□ -0
RNF40-209ENST00000566703 FGF22Q9HCT0 170 aa15.03■□□□□ -0
RNF40-209ENST00000566703 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.03■□□□□ -0
RNF40-209ENST00000566703 PHTF1Q9UMS5 762 aa15.03■□□□□ -0
RNF40-209ENST00000566703 CASC3O15234 703 aaKnown RBP15.02■□□□□ -0
RNF40-209ENST00000566703 NVLO15381 856 aaKnown RBP15.02■□□□□ -0
RNF40-209ENST00000566703 NOBOXO60393 691 aa15.02■□□□□ -0
RNF40-209ENST00000566703 TEAD1P28347 426 aa15.02■□□□□ -0
RNF40-209ENST00000566703 PIGHQ14442 188 aaPredicted RBP15.02■□□□□ -0
RNF40-209ENST00000566703 HLTFQ14527 1009 aaKnown RBP eCLIP15.02■□□□□ -0
RNF40-209ENST00000566703 ACOX1Q15067 660 aa15.02■□□□□ -0
RNF40-209ENST00000566703 CLPPQ16740 277 aaPredicted RBP15.02■□□□□ -0
RNF40-209ENST00000566703 FIGNQ5HY92 759 aa15.02■□□□□ -0
RNF40-209ENST00000566703 KCTD16Q68DU8 428 aa15.02■□□□□ -0
RNF40-209ENST00000566703 TMCO3Q6UWJ1 677 aa15.02■□□□□ -0
RNF40-209ENST00000566703 CCDC81Q6ZN84 652 aa15.02■□□□□ -0
RNF40-209ENST00000566703 POLNQ7Z5Q5 900 aa15.02■□□□□ -0
RNF40-209ENST00000566703 LRRC49Q8IUZ0 686 aa15.02■□□□□ -0
RNF40-209ENST00000566703 KIAA1524Q8TCG1 905 aa15.02■□□□□ -0
RNF40-209ENST00000566703 ZNF653Q96CK0 615 aa15.02■□□□□ -0
RNF40-209ENST00000566703 NSMCE3Q96MG7 304 aa15.02■□□□□ -0
RNF40-209ENST00000566703 CCNL2Q96S94 520 aaPredicted RBP15.02■□□□□ -0
RNF40-209ENST00000566703 TEX101Q9BY14 249 aa15.02■□□□□ -0
RNF40-209ENST00000566703 B3GNT4Q9C0J1 378 aa15.02■□□□□ -0
RNF40-209ENST00000566703 TMEM168Q9H0V1 697 aa15.02■□□□□ -0
RNF40-209ENST00000566703 DPEP2Q9H4A9 486 aa15.02■□□□□ -0
RNF40-209ENST00000566703 CYP4F12Q9HCS2 524 aa15.02■□□□□ -0
RNF40-209ENST00000566703 MRPL40Q9NQ50 206 aaKnown RBP15.02■□□□□ -0
RNF40-209ENST00000566703 PHPT1Q9NRX4 125 aaPredicted RBP15.02■□□□□ -0
RNF40-209ENST00000566703 LRIT1Q9P2V4 623 aa15.02■□□□□ -0
RNF40-209ENST00000566703 B4GALT6Q9UBX8 382 aa15.02■□□□□ -0
RNF40-209ENST00000566703 ATXN7L1Q9ULK2 861 aaPredicted RBP15.02■□□□□ -0
RNF40-209ENST00000566703 PMS2P1A4D2B8 440 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 PSMD11O00231 422 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 ZW10O43264 779 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 HEXIM1O94992 359 aaKnown RBP15.01□□□□□ -0.01
RNF40-209ENST00000566703 PEX11BO96011 259 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 JMJD7P0C870 316 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 CYP2A6P11509 494 aaPredicted RBP15.01□□□□□ -0.01
RNF40-209ENST00000566703 MYCLP1P12525 358 aaPredicted RBP15.01□□□□□ -0.01
RNF40-209ENST00000566703 PLA2G2AP14555 144 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 CCNB1P14635 433 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 IL1R2P27930 398 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 SLC5A2P31639 672 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 VIPR1P32241 457 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 PEX6Q13608 980 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 ARHGEF7Q14155 803 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 ZNF235Q14590 738 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 ANO6Q4KMQ2 910 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 XKR5Q6UX68 686 aa15.01□□□□□ -0.01
RNF40-209ENST00000566703 NYAP1Q6ZVC0 841 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms