RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-215	ENST00000566682	ENC1	O14682	589 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	FPGT	O14772	594 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	OPHN1	O60890	802 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	CER1	O95813	267 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	ALPI	P09923	528 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	ELFN1	P0C7U0	828 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	THEGL	P0DJG4	465 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	HNF1B	P35680	557 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	NXPH1	P58417	271 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	RPL26	P61254	145 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	AGER	Q15109	404 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	SLC14A2	Q15849	920 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	CNGA3	Q16281	694 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	PCSK7	Q16549	785 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	ZNF569	Q5MCW4	686 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	PRAMEF14	Q5SWL7	426 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	USP45	Q70EL2	814 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	KDELC2	Q7Z4H8	507 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	SPATS2	Q86XZ4	545 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	LPCAT1	Q8NF37	534 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	OR13H1	Q8NG92	308 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	SLC35B2	Q8TB61	432 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	FAM174A	Q8TBP5	190 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	FCRL5	Q96RD9	977 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	C1QTNF7	Q9BXJ2	289 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	USP29	Q9HBJ7	922 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	GDF3	Q9NR23	364 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	MBNL1	Q9NR56	388 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	DLL3	Q9NYJ7	618 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	UBP1	Q9NZI7	540 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	TRHDE	Q9UKU6	1024 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	PYCARD	Q9ULZ3	195 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	RPL26L1	Q9UNX3	145 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	JRKL	Q9Y4A0	524 aa		13.73	□□□□□ -0.21
SPG7-215	ENST00000566682	TDRD6	O60522	2096 aa	Known RBP	13.73	□□□□□ -0.21
SPG7-215	ENST00000566682		A0A0U1RQS6	177 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	GOLGA8CP	A6NN73	597 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682		F5H423	210 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	TM4SF5	O14894	197 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	PMPCB	O75439	489 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	RECQL5	O94762	991 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	HEXIM1	O94992	359 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	GM2A	P17900	193 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	LHCGR	P22888	699 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	CXCR5	P32302	372 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	IGFALS	P35858	605 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ID4	P47928	161 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	CDK18	Q07002	472 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ARHGEF7	Q14155	803 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	LRRC14	Q15048	493 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ACOX1	Q15067	660 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ZNF423	Q2M1K9	1284 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	WSCD2	Q2TBF2	565 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ANKRD20A2	Q5SQ80	823 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ANKRD20A1	Q5TYW2	823 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ANKRD20A3	Q5VUR7	823 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	DENND2C	Q68D51	928 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	KYAT3	Q6YP21	454 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	KDM7A	Q6ZMT4	941 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682		Q6ZSR6	202 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	TSPAN33	Q86UF1	283 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	CBARP	Q8N350	705 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	SLC35F6	Q8N357	371 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	TRIB3	Q96RU7	358 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	RTKN	Q9BST9	563 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	MLPH	Q9BV36	600 aa	Predicted RBP	13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	ADGRE3	Q9BY15	652 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	FAM153A	Q9UHL3	310 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	RSPH14	Q9UHP6	348 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	DNPEP	Q9ULA0	475 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	LAMA1	P25391	3075 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	CFAP54	Q96N23	3096 aa		13.72	□□□□□ -0.21
SPG7-215	ENST00000566682	KIF5C	O60282	957 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	CEP104	O60308	925 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	DFNA5	O60443	496 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	STK10	O94804	968 aa	Known RBP	13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	RABIF	P47224	123 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	PFN3	P60673	137 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	GALNT3	Q14435	633 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	IRF4	Q15306	451 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	QPCT	Q16769	361 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	CRTC1	Q6UUV9	634 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	KDELC1	Q6UW63	502 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	HSD11B1L	Q7Z5J1	315 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	SLC22A18AS	Q8N1D0	253 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	CCDC110	Q8TBZ0	833 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	C1orf54	Q8WWF1	131 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	ATG4A	Q8WYN0	398 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	IFT43	Q96FT9	208 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	COQ10A	Q96MF6	247 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	ELF4	Q99607	663 aa	Predicted RBP	13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	TMEM121	Q9BTD3	319 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	GBA3	Q9H227	469 aa		13.71	□□□□□ -0.21
SPG7-215	ENST00000566682	ERVMER34-1	Q9H9K5	563 aa		13.71	□□□□□ -0.21

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