RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CSHL1Q14406 222 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 ISOC1Q96CN7 298 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 VPS50Q96JG6 964 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 ADI1Q9BV57 179 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 CSNK1G1Q9HCP0 422 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 PALMDQ9NP74 551 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 UBP1Q9NZI7 540 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 CDH9Q9ULB4 789 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 ZSCAN9O15535 394 aaPredicted RBP21.66■■□□□ 1.06
SPSB3-208ENST00000566339 AKAP5P24588 427 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 SOX4Q06945 474 aaPredicted RBP21.66■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF460Q14592 562 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 UBXN11Q5T124 520 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 ACBD5Q5T8D3 534 aaPredicted RBP21.66■■□□□ 1.06
SPSB3-208ENST00000566339 BHLHA9Q7RTU4 235 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 ARHGAP12Q8IWW6 846 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 SMYD1Q8NB12 490 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 IPMKQ8NFU5 416 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 CANT1Q8WVQ1 401 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 C19orf60Q96EN9 201 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 ACSS2Q9NR19 701 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 SLC38A7Q9NVC3 462 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 HHLA1C9JL84 531 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 SLC7A4O43246 635 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 RASAL1O95294 804 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 IGLV3-25P01717 112 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 DCKP27707 260 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 GALK1P51570 392 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 RALGDSQ12967 914 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 DUSP28Q4G0W2 176 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 TBCELQ5QJ74 424 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF678Q5SXM1 525 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 WSCD1Q658N2 575 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 PAPD5Q8NDF8 572 aaKnown RBP21.65■■□□□ 1.06
SPSB3-208ENST00000566339 TMIGD2Q96BF3 282 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 SMARCD1Q96GM5 515 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 MYRFLQ96LU7 910 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF512Q96ME7 567 aaPredicted RBP21.65■■□□□ 1.06
SPSB3-208ENST00000566339 FSD1LQ9BXM9 530 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 POPDC3Q9HBV1 291 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 CRTAC1Q9NQ79 661 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 CHST12Q9NRB3 414 aa21.65■■□□□ 1.06
SPSB3-208ENST00000566339 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.65■■□□□ 1.06
SPSB3-208ENST00000566339 TTC24A2A3L6 582 aaPredicted RBP21.64■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF839A8K0R7 811 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 SOCS2O14508 198 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 MAFKO60675 156 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 TIPRLO75663 272 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 GRIA3P42263 894 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 MAGEA8P43361 318 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 NRG1Q02297 640 aaPredicted RBP21.64■■□□□ 1.06
SPSB3-208ENST00000566339 EIF4EBP2Q13542 120 aaPredicted RBP21.64■■□□□ 1.06
SPSB3-208ENST00000566339 FUNDC1Q8IVP5 155 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 ZMIZ2Q8NF64 920 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 SPATA22Q8NHS9 363 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 BORCS5Q969J3 196 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 TRIM54Q9BYV2 358 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 ATP13A1Q9HD20 1204 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 NEU3Q9UQ49 428 aa21.64■■□□□ 1.06
SPSB3-208ENST00000566339 A0A1B0GTW7 788 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 ATP6V1B2P21281 511 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 LBX1P52954 281 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 GRSF1Q12849 480 aaKnown RBP eCLIP21.64■■□□□ 1.05
SPSB3-208ENST00000566339 SNX17Q15036 470 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 MANEALQ5VSG8 457 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 AFMIDQ63HM1 303 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 ABRAXAS1Q6UWZ7 409 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 PATL1Q86TB9 770 aaKnown RBP21.64■■□□□ 1.05
SPSB3-208ENST00000566339 CLVS1Q8IUQ0 354 aaPredicted RBP21.64■■□□□ 1.05
SPSB3-208ENST00000566339 MIER2Q8N344 545 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 TRPV3Q8NET8 790 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 RSPH1Q8WYR4 309 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 PEX13Q92968 403 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 OSMRQ99650 979 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 TBC1D23Q9NUY8 699 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 OSER1Q9NX31 292 aa21.64■■□□□ 1.05
SPSB3-208ENST00000566339 PIN4Q9Y237 131 aaKnown RBP21.64■■□□□ 1.05
SPSB3-208ENST00000566339 WASH4PA8MWX3 477 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 DLGAP1O14490 977 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 ZNF12P17014 697 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 GJA5P36382 358 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 CCT8P50990 548 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 HERVK_113P63132 956 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 TMED1Q13445 227 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 ZNF829Q3KNS6 432 aaPredicted RBP21.63■■□□□ 1.05
SPSB3-208ENST00000566339 UGT3A2Q3SY77 523 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 HECTD2Q5U5R9 776 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 ISLR2Q6UXK2 745 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 CYP2R1Q6VVX0 501 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 RAB44Q7Z6P3 723 aaPredicted RBP21.63■■□□□ 1.05
SPSB3-208ENST00000566339 PTRH1Q86Y79 214 aaKnown RBP21.63■■□□□ 1.05
SPSB3-208ENST00000566339 MRGPRX2Q96LB1 330 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 PPP1R10Q96QC0 940 aaKnown RBP21.63■■□□□ 1.05
SPSB3-208ENST00000566339 ERVK-6Q9BXR3 956 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 SLC25A51Q9H1U9 297 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 SMOXQ9NWM0 555 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 VWA7Q9Y334 891 aa21.63■■□□□ 1.05
SPSB3-208ENST00000566339 A0A0J9YYE9 177 aa21.62■■□□□ 1.05
SPSB3-208ENST00000566339 NEMP2A6NFY4 417 aa21.62■■□□□ 1.05
SPSB3-208ENST00000566339 MT-CYBP00156 380 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms