RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-215	ENST00000565442	PSG1	P11464	419 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	ARSB	P15848	533 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	MYF6	P23409	242 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	HOXD13	P35453	343 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	RFX5	P48382	616 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	PRKG2	Q13237	762 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	MYBPC2	Q14324	1141 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	DRAP1	Q14919	205 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	QSOX2	Q6ZRP7	698 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442		Q6ZSV7	163 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	USP43	Q70EL4	1123 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	PATL1	Q86TB9	770 aa	Known RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	HAPLN4	Q86UW8	402 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	ARHGAP12	Q8IWW6	846 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	CCDC13	Q8IYE1	715 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	ZBTB2	Q8N680	514 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	HUS1B	Q8NHY5	278 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	ARRDC2	Q8TBH0	407 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	NEK9	Q8TD19	979 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	SCFD2	Q8WU76	684 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	ERGIC1	Q969X5	290 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	OTULIN	Q96BN8	352 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	CMTM3	Q96MX0	182 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	ZNF570	Q96NI8	536 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	RSF1	Q96T23	1441 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	KAT14	Q9H8E8	782 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	RRP7BP	Q9NSQ0	103 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	CISD1	Q9NZ45	108 aa	Known RBP	4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	DLGAP2	Q9P1A6	1054 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	RAI2	Q9Y5P3	530 aa		4.59	□□□□□ -1.67
CHD9-215	ENST00000565442	FAM237A	A0A1B0GTK4	181 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	MYO1G	B0I1T2	1018 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	MS4A18	H0YCH9	400 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	ITM2A	O43736	263 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	IPO7	O95373	1038 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	HOXB5	P09067	269 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	TBXAS1	P24557	533 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	TM4SF1	P30408	202 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	PIGA	P37287	484 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	NANOS2	P60321	138 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	ZP1	P60852	638 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	HYAL1	Q12794	435 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	OLIG2	Q13516	323 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442		Q6ZTC4	211 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	MON1B	Q7L1V2	547 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	PIM3	Q86V86	326 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	SFTPA2	Q8IWL1	248 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	CCDC105	Q8IYK2	499 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	TMEM163	Q8TC26	289 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	URB1-AS1	Q96HZ7	61 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	LYZL4	Q96KX0	146 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	C1QTNF5	Q9BXJ0	243 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	SH2D4A	Q9H788	454 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	SYNC	Q9H7C4	482 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	TMEM51	Q9NW97	253 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	ADD3	Q9UEY8	706 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	VPS28	Q9UK41	221 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	ZNF215	Q9UL58	517 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	NFE2L3	Q9Y4A8	694 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	SRPRB	Q9Y5M8	271 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	INSL5	Q9Y5Q6	135 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442	CEPT1	Q9Y6K0	416 aa		4.58	□□□□□ -1.68
CHD9-215	ENST00000565442		A0A1W2PRG0	241 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	FRMD3	A2A2Y4	597 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	BTBD18	B2RXH4	712 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442		H3BNX3	289 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	VILL	O15195	856 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	KRT86	O43790	486 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	LCAT	P04180	440 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	MMP2	P08253	660 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	HOXB2	P14652	356 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	ALOX12	P18054	663 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	GNLY	P22749	145 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	MC1R	Q01726	317 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	CREB5	Q02930	508 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	NIPAL4	Q0D2K0	466 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	NAE1	Q13564	534 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	KRT81	Q14533	505 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	HNF4G	Q14541	408 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	TOMM20	Q15388	145 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	C2orf68	Q2NKX9	166 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	MMEL1	Q495T6	779 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	DCAF6	Q58WW2	860 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	OTUD1	Q5VV17	481 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	BEST2	Q8NFU1	509 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	POMGNT1	Q8WZA1	660 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	C1orf74	Q96LT6	269 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	CLK4	Q9HAZ1	481 aa	Known RBP	4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	PLAC1	Q9HBJ0	212 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	RANGRF	Q9HD47	186 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	PROCR	Q9UNN8	238 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	SLC45A1	Q9Y2W3	748 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442	SQOR	Q9Y6N5	450 aa		4.57	□□□□□ -1.68
CHD9-215	ENST00000565442		A0A1B0GVT2	93 aa		4.56	□□□□□ -1.68

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