RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CAPN11Q9UMQ6 739 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 OR1A2Q9Y585 309 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 RAI2Q9Y5P3 530 aa12.23□□□□□ -0.45
GTF3C1-204ENST00000564664 BPTFQ12830 3046 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 SHROOM3Q8TF72 1996 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 CCDC187A0A096LP49 1063 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 CAPN8A6NHC0 703 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 MYO1FO00160 1098 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 ZW10O43264 779 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 MAFKO60675 156 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 PEX11BO96011 259 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 CYP1A2P05177 515 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 RARAP10276 462 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 CYP2A6P11509 494 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 GLB1P16278 677 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 AMPD1P23109 780 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 IL1R2P27930 398 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 TEAD1P28347 426 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 PBX1P40424 430 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 UBASH3AP57075 661 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 TMPRSS3P57727 454 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 FANCCQ00597 558 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 SLC10A7Q0GE19 358 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 HADHQ16836 314 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 MARC1Q5VT66 337 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 HGSNATQ68CP4 663 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 RD3Q7Z3Z2 195 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 GPR156Q8NFN8 814 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 PCDH19Q8TAB3 1148 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 KCNE4Q8WWG9 221 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 FUBP1Q96AE4 644 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 TMEM159Q96B96 161 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 SCRN2Q96FV2 425 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 ATXN7L3BQ96GX2 97 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 LIN37Q96GY3 246 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 COQ10AQ96MF6 247 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 FCRL3Q96P31 734 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 BBC3Q96PG8 261 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 STRADBQ9C0K7 418 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 SATB2Q9UPW6 733 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 PPIL1Q9Y3C6 166 aa12.22□□□□□ -0.45
GTF3C1-204ENST00000564664 VIPR1P32241 457 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 SKOR1P84550 965 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 ACOX1Q15067 660 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 TDRD12Q587J7 1177 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 TAF8Q7Z7C8 310 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 CLEC14AQ86T13 490 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 NLRP8Q86W28 1048 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 RAVER1Q8IY67 606 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 ATPAF2Q8N5M1 289 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 TEX26Q8N6G2 289 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 PLA2G15Q8NCC3 412 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 FAM71BQ8TC56 605 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 SNRNP27Q8WVK2 155 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 HSPH1Q92598 858 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 FATE1Q969F0 183 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 CRELD1Q96HD1 420 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 TMEM74Q96NL1 305 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 GFM1Q96RP9 751 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 THAP2Q9H0W7 228 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 WDR26Q9H7D7 661 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 PCDH18Q9HCL0 1135 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 PHPT1Q9NRX4 125 aaPredicted RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 B4GALT6Q9UBX8 382 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 AMACRQ9UHK6 382 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 LUC7L2Q9Y383 392 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 PCDHGC4Q9Y5F7 938 aa12.21□□□□□ -0.45
GTF3C1-204ENST00000564664 LRRK1Q38SD2 2015 aa12.21□□□□□ -0.46
GTF3C1-204ENST00000564664 TMEM202A6NGA9 273 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 CDRT15L2A8MXV6 281 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 NUDT21O43809 227 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 HEXIM1O94992 359 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 PRKCGP05129 697 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 PYGLP06737 847 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 CELA2BP08218 269 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 MYCLP1P12525 358 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 GM2AP17900 193 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 MMP13P45452 471 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 RHDQ02161 417 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 DPTQ07507 201 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 C19orf57Q0VDD7 668 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 KRT81Q14533 505 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 CLPPQ16740 277 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 SMTNL2Q2TAL5 461 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 C3orf38Q5JPI3 329 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 CCDC122Q5T0U0 273 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 ARMC12Q5T9G4 340 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 TIGD7Q6NT04 549 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 KYQ8NBH2 561 aa12.2□□□□□ -0.46
GTF3C1-204ENST00000564664 FAM46DQ8NEK8 389 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms