RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 Q6ZS52 159 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 USP45Q70EL2 814 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 TRMT10CQ7L0Y3 403 aaKnown RBP12.96□□□□□ -0.33
SPG7-209ENST00000564047 SYT13Q7L8C5 426 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 MMAAQ8IVH4 418 aaKnown RBP12.96□□□□□ -0.33
SPG7-209ENST00000564047 MPP5Q8N3R9 675 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 GOLGA6L1Q8N7Z2 621 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 FBXO36Q8NEA4 188 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 PJA1Q8NG27 643 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 PYROXD1Q8WU10 500 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 CLDN23Q96B33 292 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 SCRN2Q96FV2 425 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 PKNOX2Q96KN3 472 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 CNTNAP3BQ96NU0 1288 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 MCCC1Q96RQ3 725 aaPredicted RBP12.96□□□□□ -0.33
SPG7-209ENST00000564047 LYSMD1Q96S90 227 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 TRABDQ9H4I3 376 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 MRM3Q9HC36 420 aaKnown RBP12.96□□□□□ -0.33
SPG7-209ENST00000564047 MAGEE1Q9HCI5 957 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 SYBUQ9NX95 663 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
SPG7-209ENST00000564047 SAMD15Q9P1V8 674 aa12.96□□□□□ -0.33
SPG7-209ENST00000564047 CHD6Q8TD26 2715 aa12.96□□□□□ -0.34
SPG7-209ENST00000564047 HEATR9A2RTY3 570 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 CAPN8A6NHC0 703 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 UPK3BL1B0FP48 263 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 UPK3BL2E5RIL1 263 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 BANF1O75531 89 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 TIMP2P16035 220 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 TSHRP16473 764 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 PGAM1P18669 254 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 AOC1P19801 751 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 RPS9P46781 194 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 PSMD8P48556 350 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 PMS2P54278 862 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 RPS14P62263 151 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 ZBTB16Q05516 673 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 POU6F1Q14863 301 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 FASTKD3Q14CZ7 662 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 CWF19L1Q69YN2 538 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 CASC4Q6P4E1 433 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 PKN3Q6P5Z2 889 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 TMEM92Q6UXU6 159 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 ZNF771Q7L3S4 317 aaPredicted RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 PARS2Q7L3T8 475 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 NLRP9Q7RTR0 991 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 ANKMY2Q8IV38 441 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 IGDCC3Q8IVU1 814 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 PPHLN1Q8NEY8 458 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 BRSK1Q8TDC3 778 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 BLOC1S5Q8TDH9 187 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 ARRDC3Q96B67 414 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 STAMBPL1Q96FJ0 436 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 C9orf72Q96LT7 481 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 TTC25Q96NG3 672 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 WDR83Q9BRX9 315 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 KIFC1Q9BW19 673 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 HDAC8Q9BY41 377 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 CDC42EP4Q9H3Q1 356 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 DYRK4Q9NR20 520 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 ZC3H7BQ9UGR2 993 aaKnown RBP12.95□□□□□ -0.34
SPG7-209ENST00000564047 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 CHMP2BQ9UQN3 213 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 TCAF1Q9Y4C2 921 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 SPO11Q9Y5K1 396 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 MAD1L1Q9Y6D9 718 aa12.95□□□□□ -0.34
SPG7-209ENST00000564047 MAP1BP46821 2468 aaKnown RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 FAM237BA0A1B0GVD1 139 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 STK25O00506 426 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 OPA1O60313 960 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 CRTAMO95727 393 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 TTC4O95801 387 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 SYF2O95926 243 aaKnown RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 GSTA2P09210 222 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 ALPIP09923 528 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 CYP2A6P11509 494 aaPredicted RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 CTPS1P17812 591 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 XPAP23025 273 aaPredicted RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 HNF1BP35680 557 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 ABL2P42684 1182 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 NEK3P51956 506 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 DGKEP52429 567 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 CRADDP78560 199 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 GAS6Q14393 721 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 TAF1AQ15573 450 aaPredicted RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 HP1BP3Q5SSJ5 553 aaPredicted RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 DENND2CQ68D51 928 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 FBXL19Q6PCT2 694 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 ERN2Q76MJ5 926 aaKnown RBP12.94□□□□□ -0.34
SPG7-209ENST00000564047 TTC7BQ86TV6 843 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 TMEM135Q86UB9 458 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 TMPRSS6Q8IU80 811 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 PALM2Q8IXS6 379 aa12.94□□□□□ -0.34
SPG7-209ENST00000564047 DTWD2Q8NBA8 298 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms