RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 OR4K2Q8NGD2 314 aa22.01■■□□□ 1.11
LINC01960-201ENST00000563759 HDAC10Q969S8 669 aa22.01■■□□□ 1.11
LINC01960-201ENST00000563759 SELENOSQ9BQE4 189 aa22.01■■□□□ 1.11
LINC01960-201ENST00000563759 OSBPL1AQ9BXW6 950 aa22.01■■□□□ 1.11
LINC01960-201ENST00000563759 GPR63Q9BZJ6 419 aa22.01■■□□□ 1.11
LINC01960-201ENST00000563759 POLR3BQ9NW08 1133 aaPredicted RBP22.01■■□□□ 1.11
LINC01960-201ENST00000563759 PHTF1Q9UMS5 762 aa22.01■■□□□ 1.11
LINC01960-201ENST00000563759 SLC7A4O43246 635 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 RPP40O75818 363 aaKnown RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 SNRPAP09012 282 aaKnown RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 CNTFP26441 200 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 ARSDP51689 593 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 ACVR1Q04771 509 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 BMPR2Q13873 1038 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 SMAD2Q15796 467 aaKnown RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 ARSIQ5FYB1 569 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 USP45Q70EL2 814 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 LYSMD3Q7Z3D4 306 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 SUGP1Q8IWZ8 645 aaKnown RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 ARFGAP2Q8N6H7 521 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 CALML6Q8TD86 181 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 LRIG1Q96JA1 1093 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 SRPK1Q96SB4 655 aaKnown RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 NLE1Q9NVX2 485 aaPredicted RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 C1orf232A0A0U1RR37 186 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 TRIM49D1C9J1S8 452 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 SPECC1L-ADORA2AF8WAN1 911 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 CTHP32929 405 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 ATP1A2P50993 1020 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 GALK1P51570 392 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 CBX1P83916 185 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 EGFLAMQ63HQ2 1017 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 NEPROQ6NW34 567 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 BRAT1Q6PJG6 821 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 CNTN4Q8IWV2 1026 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 MZB1Q8WU39 189 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 MTBPQ96DY7 904 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 TBATAQ96M53 351 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 SMC6Q96SB8 1091 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 TMEM245Q9H330 911 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 FBRSL1Q9HCM7 1045 aaKnown RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 ZDHHC4Q9NPG8 344 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 THAP10Q9P2Z0 257 aaPredicted RBP22■■□□□ 1.11
LINC01960-201ENST00000563759 ACTL7BQ9Y614 415 aa22■■□□□ 1.11
LINC01960-201ENST00000563759 STX7O15400 261 aaKnown RBP21.99■■□□□ 1.11
LINC01960-201ENST00000563759 CTSLP07711 333 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 IL12RB1P42701 662 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 SLC1A2P43004 574 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 POLR2LP62875 67 aaKnown RBP21.99■■□□□ 1.11
LINC01960-201ENST00000563759 GRTP1Q5TC63 336 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 MROH9Q5TGP6 573 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 KDM7AQ6ZMT4 941 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 PTAR1Q7Z6K3 402 aaPredicted RBP21.99■■□□□ 1.11
LINC01960-201ENST00000563759 SLC44A3Q8N4M1 653 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 OR8D1Q8WZ84 308 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 ATXN7L3BQ96GX2 97 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 RBBP8Q99708 897 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 MFSD1Q9H3U5 465 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 PKP3Q9Y446 797 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 PIAS3Q9Y6X2 628 aa21.99■■□□□ 1.11
LINC01960-201ENST00000563759 A0A0U1RQS6 177 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 A0A1W2PPM1 405 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 SIN3BO75182 1162 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 MT-ND3P03897 115 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 F7P08709 466 aaPredicted RBP21.98■■□□□ 1.11
LINC01960-201ENST00000563759 BRAFP15056 766 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 HNF1BP35680 557 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 ELAVL3Q14576 367 aaKnown RBP21.98■■□□□ 1.11
LINC01960-201ENST00000563759 UGP2Q16851 508 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 DENND6AQ8IWF6 608 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 C4orf33Q8N1A6 199 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 TTC30BQ8N4P2 665 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 SPOCK2Q92563 424 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 DNASE1L2Q92874 299 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 SUDS3Q9H7L9 328 aaPredicted RBP21.98■■□□□ 1.11
LINC01960-201ENST00000563759 ZFYVE1Q9HBF4 777 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 TRPV5Q9NQA5 729 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 HEBP1Q9NRV9 189 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 CACNA2D2Q9NY47 1150 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 OR51F1A6NGY5 319 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 PRNPP04156 253 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 EPHX1P07099 455 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 ASGR2P07307 311 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 ITGA2BP08514 1039 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 KRT4P19013 534 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 SPRP35270 261 aaPredicted RBP21.98■■□□□ 1.11
LINC01960-201ENST00000563759 HADHAP40939 763 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 CSE1LP55060 971 aaKnown RBP21.98■■□□□ 1.11
LINC01960-201ENST00000563759 CTBP1Q13363 440 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 LEXMQ3ZCV2 418 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 C9orf64Q5T6V5 341 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 PTCRAQ6ISU1 281 aaPredicted RBP21.98■■□□□ 1.11
LINC01960-201ENST00000563759 TXNDC11Q6PKC3 985 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 CHPFQ8IZ52 775 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 CNPY4Q8N129 248 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 STK40Q8N2I9 435 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 ZNF513Q8N8E2 541 aaPredicted RBP21.98■■□□□ 1.11
LINC01960-201ENST00000563759 SCRN2Q96FV2 425 aa21.98■■□□□ 1.11
LINC01960-201ENST00000563759 CCDC162PA2VCL2 907 aa21.97■■□□□ 1.11
LINC01960-201ENST00000563759 NPIPB15A6NHN6 443 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms