RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 MRPL40Q9NQ50 206 aaKnown RBP8.36□□□□□ -1.07
CKLF-208ENST00000563092 ZNF71Q9NQZ8 489 aaPredicted RBP8.36□□□□□ -1.07
CKLF-208ENST00000563092 SPATS2LQ9NUQ6 558 aaKnown RBP8.36□□□□□ -1.07
CKLF-208ENST00000563092 APEX2Q9UBZ4 518 aa8.36□□□□□ -1.07
CKLF-208ENST00000563092 OR12D3Q9UGF7 316 aa8.36□□□□□ -1.07
CKLF-208ENST00000563092 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.36□□□□□ -1.07
CKLF-208ENST00000563092 ST14Q9Y5Y6 855 aa8.36□□□□□ -1.07
CKLF-208ENST00000563092 ICE1Q9Y2F5 2266 aa8.36□□□□□ -1.07
CKLF-208ENST00000563092 GTPBP10A4D1E9 387 aaKnown RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 PRR19A6NJB7 356 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 B4DGG1 531 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 INSIG1O15503 277 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 MTSS1O43312 755 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 DUX1O43812 170 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 RAMP2O60895 175 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 SMC2O95347 1197 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 FUCA1P04066 466 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 CCNB1P14635 433 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 SLC9A1P19634 815 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 MAP4P27816 1152 aaKnown RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 OAS2P29728 719 aaKnown RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 CSF2RBP32927 897 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 ADRA1BP35368 520 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 LIG3P49916 1009 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 RNASE9P60153 205 aaKnown RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 PTK2Q05397 1052 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 RAD51Q06609 339 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 CDC20Q12834 499 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 KLRB1Q12918 225 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 RALGDSQ12967 914 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 LACTB2Q53H82 288 aaPredicted RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 DPY19L2P1Q6NXN4 242 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 SLC47A2Q86VL8 602 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 FAM131BQ86XD5 332 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 ZSWIM9Q86XI8 627 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 ELOA2Q8IYF1 753 aaPredicted RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 FAM71AQ8IYT1 594 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 IL22RA1Q8N6P7 574 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 KIAA1524Q8TCG1 905 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 APOBEC4Q8WW27 367 aaKnown RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 ART4Q93070 314 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 SMARCE1Q969G3 411 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 C18orf8Q96DM3 657 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 CFAP57Q96MR6 1250 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 TIGD1Q96MW7 591 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 ZNF641Q96N77 438 aaPredicted RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 TEFMQ96QE5 360 aaKnown RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 SPSB2Q99619 263 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 DPYSL5Q9BPU6 564 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 LGR4Q9BXB1 951 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 KLC2Q9H0B6 622 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 DPEP2Q9H4A9 486 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 SIX2Q9NPC8 291 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 KCNK4Q9NYG8 393 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 LHX3Q9UBR4 397 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 AJAP1Q9UKB5 411 aaPredicted RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 HPCAL4Q9UM19 191 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 TMEM184BQ9Y519 407 aaPredicted RBP8.35□□□□□ -1.07
CKLF-208ENST00000563092 CREBBPQ92793 2442 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 CSMD1Q96PZ7 3565 aa8.35□□□□□ -1.07
CKLF-208ENST00000563092 IGHV1OR21-1A0A087WYE8 117 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 LOC101059948A0A1B0GTJ6 334 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 PRSS38A1L453 326 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 K7EM74 188 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 AGRPO00253 132 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 CACNB4O00305 520 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 FOXN3O00409 490 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 BUB1BO60566 1050 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 RECQL5O94762 991 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 LRIG2O94898 1065 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 IGSF6O95976 241 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 PCCBP05166 539 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 KELP23276 732 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 KRT9P35527 623 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 MAZP56270 477 aaKnown RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 RAB15P59190 212 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 ABHD18Q0P651 414 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 STIM1Q13586 685 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 GRM3Q14832 879 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 CYTH1Q15438 398 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 RAB6CQ53S08 254 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 FAM102AQ5T9C2 384 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 AFMIDQ63HM1 303 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 CAPRIN2Q6IMN6 1127 aaKnown RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 TCTN3Q6NUS6 607 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 BRAT1Q6PJG6 821 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 LEKR1Q6ZMV7 388 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 TIPARPQ7Z3E1 657 aaKnown RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 ATCAYQ86WG3 371 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 NAGSQ8N159 534 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 PELI3Q8N2H9 469 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 CBARPQ8N350 705 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 TMEM35BQ8NCS4 154 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 CCDC112Q8NEF3 446 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 NELFBQ8WX92 580 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 CENPIQ92674 756 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 ECHDC3Q96DC8 303 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 RTP4Q96DX8 246 aa8.34□□□□□ -1.07
CKLF-208ENST00000563092 SCARF2Q96GP6 870 aaPredicted RBP8.34□□□□□ -1.07
CKLF-208ENST00000563092 CRACR2AQ9BSW2 395 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms